Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01060 and H281DRAFT_01061 overlap by 4 nucleotides H281DRAFT_01061 and H281DRAFT_01062 are separated by 125 nucleotides H281DRAFT_01062 and H281DRAFT_01063 are separated by 462 nucleotides H281DRAFT_01063 and H281DRAFT_01064 are separated by 2 nucleotides
H281DRAFT_01060: H281DRAFT_01060 - KUP system potassium uptake protein, at 1,190,828 to 1,192,705
_01060
H281DRAFT_01061: H281DRAFT_01061 - hypothetical protein, at 1,192,702 to 1,192,875
_01061
H281DRAFT_01062: H281DRAFT_01062 - hypothetical protein, at 1,193,001 to 1,193,606
_01062
H281DRAFT_01063: H281DRAFT_01063 - hypothetical protein, at 1,194,069 to 1,194,452
_01063
H281DRAFT_01064: H281DRAFT_01064 - Tetratricopeptide (TPR) repeat, at 1,194,455 to 1,196,017
_01064
Position (kb) 1193
1194 Strain fitness (log2 ratio) -1
0
1 at 1192.135 kb on + strand, within H281DRAFT_01060 at 1192.138 kb on + strand, within H281DRAFT_01060 at 1192.163 kb on - strand, within H281DRAFT_01060 at 1192.234 kb on - strand, within H281DRAFT_01060 at 1192.272 kb on + strand, within H281DRAFT_01060 at 1192.399 kb on - strand, within H281DRAFT_01060 at 1192.401 kb on + strand, within H281DRAFT_01060 at 1192.402 kb on - strand, within H281DRAFT_01060 at 1192.521 kb on - strand at 1192.524 kb on - strand at 1192.598 kb on + strand at 1192.614 kb on + strand at 1192.641 kb on + strand at 1192.738 kb on + strand, within H281DRAFT_01061 at 1192.810 kb on + strand, within H281DRAFT_01061 at 1192.811 kb on - strand, within H281DRAFT_01061 at 1192.860 kb on + strand at 1192.860 kb on + strand at 1192.999 kb on + strand at 1192.999 kb on + strand at 1193.094 kb on - strand, within H281DRAFT_01062 at 1193.312 kb on + strand, within H281DRAFT_01062 at 1193.379 kb on + strand, within H281DRAFT_01062 at 1193.466 kb on + strand, within H281DRAFT_01062 at 1193.536 kb on - strand, within H281DRAFT_01062 at 1193.596 kb on + strand at 1193.920 kb on - strand at 1194.149 kb on + strand, within H281DRAFT_01063 at 1194.292 kb on + strand, within H281DRAFT_01063 at 1194.317 kb on - strand, within H281DRAFT_01063 at 1194.336 kb on + strand, within H281DRAFT_01063
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,192,135 + H281DRAFT_01060 0.70 +0.7 1,192,138 + H281DRAFT_01060 0.70 -1.0 1,192,163 - H281DRAFT_01060 0.71 +0.6 1,192,234 - H281DRAFT_01060 0.75 +1.2 1,192,272 + H281DRAFT_01060 0.77 +0.1 1,192,399 - H281DRAFT_01060 0.84 +1.1 1,192,401 + H281DRAFT_01060 0.84 +0.9 1,192,402 - H281DRAFT_01060 0.84 -0.1 1,192,521 - +0.3 1,192,524 - -0.7 1,192,598 + -1.1 1,192,614 + -1.0 1,192,641 + +0.1 1,192,738 + H281DRAFT_01061 0.21 -0.5 1,192,810 + H281DRAFT_01061 0.62 -0.9 1,192,811 - H281DRAFT_01061 0.63 +0.2 1,192,860 + -0.3 1,192,860 + -0.7 1,192,999 + -0.6 1,192,999 + -0.1 1,193,094 - H281DRAFT_01062 0.15 -0.0 1,193,312 + H281DRAFT_01062 0.51 +0.5 1,193,379 + H281DRAFT_01062 0.62 +0.4 1,193,466 + H281DRAFT_01062 0.77 -0.5 1,193,536 - H281DRAFT_01062 0.88 +0.7 1,193,596 + -0.3 1,193,920 - -0.1 1,194,149 + H281DRAFT_01063 0.21 -0.6 1,194,292 + H281DRAFT_01063 0.58 +0.1 1,194,317 - H281DRAFT_01063 0.65 +1.1 1,194,336 + H281DRAFT_01063 0.70 +1.4
Or see this region's nucleotide sequence