Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04471 and H281DRAFT_04472 are separated by 201 nucleotides H281DRAFT_04472 and H281DRAFT_04473 are separated by 441 nucleotides
H281DRAFT_04471: H281DRAFT_04471 - propionyl-CoA synthetase, at 198,125 to 200,032
_04471
H281DRAFT_04472: H281DRAFT_04472 - MFS transporter, FSR family, fosmidomycin resistance protein, at 200,234 to 201,517
_04472
H281DRAFT_04473: H281DRAFT_04473 - methyl-accepting chemotaxis protein, at 201,959 to 203,689
_04473
Position (kb) 200
201
202 Strain fitness (log2 ratio) -1
0
1 at 199.314 kb on + strand, within H281DRAFT_04471 at 199.324 kb on - strand, within H281DRAFT_04471 at 199.324 kb on - strand, within H281DRAFT_04471 at 199.407 kb on + strand, within H281DRAFT_04471 at 199.407 kb on + strand at 199.408 kb on - strand, within H281DRAFT_04471 at 199.773 kb on + strand, within H281DRAFT_04471 at 199.812 kb on + strand, within H281DRAFT_04471 at 199.812 kb on + strand, within H281DRAFT_04471 at 199.812 kb on + strand, within H281DRAFT_04471 at 199.812 kb on + strand, within H281DRAFT_04471 at 199.813 kb on - strand, within H281DRAFT_04471 at 199.813 kb on - strand, within H281DRAFT_04471 at 199.813 kb on - strand, within H281DRAFT_04471 at 199.813 kb on - strand, within H281DRAFT_04471 at 199.814 kb on + strand, within H281DRAFT_04471 at 199.814 kb on + strand, within H281DRAFT_04471 at 200.131 kb on + strand at 200.131 kb on + strand at 200.131 kb on + strand at 200.132 kb on - strand at 200.132 kb on - strand at 200.132 kb on - strand at 200.137 kb on - strand at 200.316 kb on + strand at 200.316 kb on + strand at 200.317 kb on - strand at 200.317 kb on - strand at 200.322 kb on + strand at 200.322 kb on + strand at 200.322 kb on + strand at 200.323 kb on - strand at 200.323 kb on - strand at 200.584 kb on - strand, within H281DRAFT_04472 at 200.718 kb on + strand, within H281DRAFT_04472 at 200.718 kb on + strand, within H281DRAFT_04472 at 200.740 kb on - strand, within H281DRAFT_04472 at 200.740 kb on - strand, within H281DRAFT_04472 at 200.745 kb on + strand, within H281DRAFT_04472 at 200.746 kb on - strand, within H281DRAFT_04472 at 200.746 kb on - strand, within H281DRAFT_04472 at 200.859 kb on + strand, within H281DRAFT_04472 at 200.859 kb on + strand, within H281DRAFT_04472 at 201.213 kb on + strand, within H281DRAFT_04472 at 201.213 kb on + strand, within H281DRAFT_04472 at 201.214 kb on - strand, within H281DRAFT_04472 at 201.214 kb on - strand, within H281DRAFT_04472 at 201.214 kb on - strand, within H281DRAFT_04472 at 201.214 kb on - strand, within H281DRAFT_04472 at 201.255 kb on + strand, within H281DRAFT_04472 at 201.256 kb on - strand, within H281DRAFT_04472 at 201.318 kb on + strand, within H281DRAFT_04472 at 201.391 kb on - strand at 201.581 kb on + strand at 201.582 kb on - strand at 201.625 kb on + strand at 201.625 kb on + strand at 201.626 kb on - strand at 201.626 kb on - strand at 201.626 kb on - strand at 201.661 kb on - strand at 201.781 kb on - strand at 201.832 kb on + strand at 201.832 kb on + strand at 201.832 kb on + strand at 201.833 kb on - strand at 201.834 kb on + strand at 201.834 kb on + strand at 201.834 kb on + strand at 201.835 kb on - strand at 201.913 kb on - strand at 201.950 kb on + strand at 201.951 kb on - strand at 201.987 kb on + strand at 201.987 kb on + strand at 201.988 kb on - strand at 202.007 kb on - strand at 202.251 kb on - strand, within H281DRAFT_04473
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 199,314 + H281DRAFT_04471 0.62 -0.4 199,324 - H281DRAFT_04471 0.63 +0.2 199,324 - H281DRAFT_04471 0.63 -0.2 199,407 + H281DRAFT_04471 0.67 +0.2 199,407 + +1.5 199,408 - H281DRAFT_04471 0.67 +0.2 199,773 + H281DRAFT_04471 0.86 +0.9 199,812 + H281DRAFT_04471 0.88 +0.8 199,812 + H281DRAFT_04471 0.88 -0.0 199,812 + H281DRAFT_04471 0.88 -0.1 199,812 + H281DRAFT_04471 0.88 +0.2 199,813 - H281DRAFT_04471 0.88 +0.1 199,813 - H281DRAFT_04471 0.88 -0.3 199,813 - H281DRAFT_04471 0.88 -0.2 199,813 - H281DRAFT_04471 0.88 +0.9 199,814 + H281DRAFT_04471 0.89 +0.8 199,814 + H281DRAFT_04471 0.89 -0.1 200,131 + -0.6 200,131 + -0.2 200,131 + +0.1 200,132 - +0.3 200,132 - -0.8 200,132 - +1.5 200,137 - -0.0 200,316 + -0.4 200,316 + -0.3 200,317 - -0.2 200,317 - +0.4 200,322 + -1.0 200,322 + -0.6 200,322 + -0.6 200,323 - -0.4 200,323 - -0.6 200,584 - H281DRAFT_04472 0.27 +0.1 200,718 + H281DRAFT_04472 0.38 -1.0 200,718 + H281DRAFT_04472 0.38 -0.8 200,740 - H281DRAFT_04472 0.39 +0.2 200,740 - H281DRAFT_04472 0.39 +0.3 200,745 + H281DRAFT_04472 0.40 +0.2 200,746 - H281DRAFT_04472 0.40 -1.6 200,746 - H281DRAFT_04472 0.40 -0.3 200,859 + H281DRAFT_04472 0.49 -0.6 200,859 + H281DRAFT_04472 0.49 +0.2 201,213 + H281DRAFT_04472 0.76 -1.2 201,213 + H281DRAFT_04472 0.76 -0.4 201,214 - H281DRAFT_04472 0.76 -0.3 201,214 - H281DRAFT_04472 0.76 -1.1 201,214 - H281DRAFT_04472 0.76 -0.1 201,214 - H281DRAFT_04472 0.76 -0.8 201,255 + H281DRAFT_04472 0.80 -1.2 201,256 - H281DRAFT_04472 0.80 -0.4 201,318 + H281DRAFT_04472 0.84 +0.3 201,391 - -0.3 201,581 + -0.5 201,582 - +0.2 201,625 + -0.5 201,625 + -1.5 201,626 - -0.5 201,626 - -0.1 201,626 - -0.3 201,661 - -0.9 201,781 - -0.5 201,832 + +0.3 201,832 + -0.6 201,832 + -0.2 201,833 - +0.4 201,834 + -0.5 201,834 + -0.2 201,834 + -0.1 201,835 - +0.8 201,913 - +0.4 201,950 + +0.0 201,951 - -0.3 201,987 + -0.2 201,987 + +0.3 201,988 - -0.4 202,007 - +1.3 202,251 - H281DRAFT_04473 0.17 -0.3
Or see this region's nucleotide sequence