Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06486 and H281DRAFT_06487 are separated by 91 nucleotides H281DRAFT_06487 and H281DRAFT_06488 are separated by 296 nucleotides
H281DRAFT_06486: H281DRAFT_06486 - Predicted signal transduction protein, at 25,051 to 26,508
_06486
H281DRAFT_06487: H281DRAFT_06487 - diguanylate cyclase (GGDEF) domain-containing protein, at 26,600 to 28,414
_06487
H281DRAFT_06488: H281DRAFT_06488 - EAL and modified HD-GYP domain-containing signal transduction protein, at 28,711 to 30,048
_06488
Position (kb) 26
27
28
29 Strain fitness (log2 ratio) -1
0
1 at 26.289 kb on + strand, within H281DRAFT_06486 at 26.309 kb on + strand, within H281DRAFT_06486 at 26.309 kb on + strand at 26.309 kb on + strand, within H281DRAFT_06486 at 26.309 kb on + strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.688 kb on - strand at 26.688 kb on - strand at 26.688 kb on - strand at 26.688 kb on - strand at 27.115 kb on - strand, within H281DRAFT_06487 at 27.360 kb on + strand, within H281DRAFT_06487 at 27.360 kb on + strand, within H281DRAFT_06487 at 27.418 kb on - strand, within H281DRAFT_06487 at 27.418 kb on - strand, within H281DRAFT_06487 at 27.581 kb on + strand, within H281DRAFT_06487 at 27.581 kb on + strand, within H281DRAFT_06487 at 27.582 kb on - strand, within H281DRAFT_06487 at 28.182 kb on + strand, within H281DRAFT_06487 at 28.228 kb on - strand, within H281DRAFT_06487 at 28.231 kb on + strand, within H281DRAFT_06487 at 28.516 kb on - strand at 28.636 kb on + strand at 28.637 kb on - strand at 28.810 kb on + strand at 28.892 kb on - strand, within H281DRAFT_06488
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 26,289 + H281DRAFT_06486 0.85 +0.2 26,309 + H281DRAFT_06486 0.86 +0.9 26,309 + +1.1 26,309 + H281DRAFT_06486 0.86 +0.2 26,309 + H281DRAFT_06486 0.86 +0.3 26,310 - H281DRAFT_06486 0.86 -0.1 26,310 - H281DRAFT_06486 0.86 -0.1 26,310 - H281DRAFT_06486 0.86 +1.0 26,310 - H281DRAFT_06486 0.86 +0.0 26,310 - H281DRAFT_06486 0.86 -0.4 26,688 - -0.6 26,688 - -0.4 26,688 - +0.3 26,688 - +0.7 27,115 - H281DRAFT_06487 0.28 +0.6 27,360 + H281DRAFT_06487 0.42 -0.1 27,360 + H281DRAFT_06487 0.42 -0.0 27,418 - H281DRAFT_06487 0.45 -1.3 27,418 - H281DRAFT_06487 0.45 -0.0 27,581 + H281DRAFT_06487 0.54 +0.5 27,581 + H281DRAFT_06487 0.54 -0.6 27,582 - H281DRAFT_06487 0.54 +1.5 28,182 + H281DRAFT_06487 0.87 +0.2 28,228 - H281DRAFT_06487 0.90 -0.0 28,231 + H281DRAFT_06487 0.90 -0.2 28,516 - -0.3 28,636 + -0.2 28,637 - +0.2 28,810 + -0.0 28,892 - H281DRAFT_06488 0.14 +0.2
Or see this region's nucleotide sequence