Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06193 and H281DRAFT_06194 are separated by 80 nucleotides H281DRAFT_06194 and H281DRAFT_06195 are separated by 276 nucleotides H281DRAFT_06195 and H281DRAFT_06196 are separated by 33 nucleotides
H281DRAFT_06193: H281DRAFT_06193 - hypothetical protein, at 82,248 to 83,075
_06193
H281DRAFT_06194: H281DRAFT_06194 - Proteolipid membrane potential modulator, at 83,156 to 83,350
_06194
H281DRAFT_06195: H281DRAFT_06195 - hypothetical protein, at 83,627 to 83,890
_06195
H281DRAFT_06196: H281DRAFT_06196 - ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module, at 83,924 to 85,891
_06196
Position (kb) 83
84 Strain fitness (log2 ratio) -1
0
1
2
3 at 82.708 kb on + strand, within H281DRAFT_06193 at 82.708 kb on + strand, within H281DRAFT_06193 at 82.708 kb on + strand, within H281DRAFT_06193 at 82.709 kb on - strand, within H281DRAFT_06193 at 82.709 kb on - strand, within H281DRAFT_06193 at 82.709 kb on - strand, within H281DRAFT_06193 at 82.754 kb on + strand, within H281DRAFT_06193 at 82.754 kb on + strand, within H281DRAFT_06193 at 82.754 kb on + strand, within H281DRAFT_06193 at 82.755 kb on - strand, within H281DRAFT_06193 at 82.755 kb on - strand, within H281DRAFT_06193 at 83.097 kb on + strand at 83.097 kb on + strand at 83.097 kb on + strand at 83.108 kb on + strand at 83.108 kb on + strand at 83.108 kb on + strand at 83.202 kb on + strand, within H281DRAFT_06194 at 83.211 kb on - strand, within H281DRAFT_06194 at 83.253 kb on - strand, within H281DRAFT_06194 at 83.342 kb on + strand at 83.343 kb on - strand at 83.354 kb on + strand at 83.377 kb on - strand at 83.407 kb on - strand at 83.409 kb on + strand at 83.409 kb on + strand at 83.409 kb on + strand at 83.523 kb on - strand at 83.523 kb on - strand at 83.591 kb on + strand at 83.592 kb on - strand at 83.598 kb on + strand at 83.804 kb on + strand, within H281DRAFT_06195 at 83.804 kb on + strand, within H281DRAFT_06195 at 83.805 kb on - strand, within H281DRAFT_06195 at 83.805 kb on - strand, within H281DRAFT_06195 at 83.805 kb on - strand, within H281DRAFT_06195 at 83.806 kb on + strand, within H281DRAFT_06195 at 83.807 kb on - strand, within H281DRAFT_06195 at 83.807 kb on - strand, within H281DRAFT_06195 at 83.860 kb on - strand, within H281DRAFT_06195 at 84.059 kb on + strand at 84.098 kb on - strand at 84.098 kb on - strand at 84.321 kb on + strand, within H281DRAFT_06196 at 84.322 kb on - strand, within H281DRAFT_06196 at 84.557 kb on + strand, within H281DRAFT_06196 at 84.557 kb on + strand, within H281DRAFT_06196 at 84.558 kb on - strand, within H281DRAFT_06196 at 84.678 kb on + strand, within H281DRAFT_06196 at 84.679 kb on - strand, within H281DRAFT_06196 at 84.686 kb on + strand, within H281DRAFT_06196 at 84.686 kb on + strand, within H281DRAFT_06196 at 84.686 kb on + strand, within H281DRAFT_06196 at 84.758 kb on + strand, within H281DRAFT_06196 at 84.759 kb on - strand, within H281DRAFT_06196 at 84.792 kb on - strand at 84.792 kb on - strand, within H281DRAFT_06196
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 82,708 + H281DRAFT_06193 0.56 +0.2 82,708 + H281DRAFT_06193 0.56 +3.2 82,708 + H281DRAFT_06193 0.56 -0.6 82,709 - H281DRAFT_06193 0.56 +0.5 82,709 - H281DRAFT_06193 0.56 -0.1 82,709 - H281DRAFT_06193 0.56 -0.2 82,754 + H281DRAFT_06193 0.61 -0.2 82,754 + H281DRAFT_06193 0.61 +0.0 82,754 + H281DRAFT_06193 0.61 +0.1 82,755 - H281DRAFT_06193 0.61 +0.7 82,755 - H281DRAFT_06193 0.61 -0.1 83,097 + -0.1 83,097 + +0.6 83,097 + -0.2 83,108 + -0.1 83,108 + -0.9 83,108 + +0.3 83,202 + H281DRAFT_06194 0.24 +0.4 83,211 - H281DRAFT_06194 0.28 -0.3 83,253 - H281DRAFT_06194 0.50 +1.1 83,342 + -0.5 83,343 - +0.0 83,354 + +0.1 83,377 - +1.1 83,407 - +0.2 83,409 + -0.2 83,409 + +0.3 83,409 + +0.2 83,523 - +0.3 83,523 - +0.5 83,591 + +0.3 83,592 - +0.1 83,598 + +0.7 83,804 + H281DRAFT_06195 0.67 -1.1 83,804 + H281DRAFT_06195 0.67 -1.0 83,805 - H281DRAFT_06195 0.67 -1.7 83,805 - H281DRAFT_06195 0.67 -0.1 83,805 - H281DRAFT_06195 0.67 +0.5 83,806 + H281DRAFT_06195 0.68 -0.2 83,807 - H281DRAFT_06195 0.68 -0.8 83,807 - H281DRAFT_06195 0.68 +0.3 83,860 - H281DRAFT_06195 0.88 +0.2 84,059 + -0.2 84,098 - +0.1 84,098 - -0.3 84,321 + H281DRAFT_06196 0.20 +0.3 84,322 - H281DRAFT_06196 0.20 +0.1 84,557 + H281DRAFT_06196 0.32 +0.2 84,557 + H281DRAFT_06196 0.32 +0.3 84,558 - H281DRAFT_06196 0.32 -0.7 84,678 + H281DRAFT_06196 0.38 -0.2 84,679 - H281DRAFT_06196 0.38 +0.6 84,686 + H281DRAFT_06196 0.39 -0.2 84,686 + H281DRAFT_06196 0.39 +0.3 84,686 + H281DRAFT_06196 0.39 +0.9 84,758 + H281DRAFT_06196 0.42 -1.2 84,759 - H281DRAFT_06196 0.42 +0.5 84,792 - -1.5 84,792 - H281DRAFT_06196 0.44 +0.1
Or see this region's nucleotide sequence