Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06190 and H281DRAFT_06191 are separated by 115 nucleotides H281DRAFT_06191 and H281DRAFT_06192 are separated by 194 nucleotides H281DRAFT_06192 and H281DRAFT_06193 are separated by 412 nucleotides
H281DRAFT_06190: H281DRAFT_06190 - DNA-binding protein H-NS, at 79,958 to 80,242
_06190
H281DRAFT_06191: H281DRAFT_06191 - hypothetical protein, at 80,358 to 80,807
_06191
H281DRAFT_06192: H281DRAFT_06192 - hypothetical protein, at 81,002 to 81,835
_06192
H281DRAFT_06193: H281DRAFT_06193 - hypothetical protein, at 82,248 to 83,075
_06193
Position (kb) 81
82 Strain fitness (log2 ratio) -1
0
1
2
3 at 80.055 kb on + strand, within H281DRAFT_06190 at 80.230 kb on + strand at 80.230 kb on + strand at 80.230 kb on + strand at 80.232 kb on + strand at 80.233 kb on - strand at 80.264 kb on - strand at 80.278 kb on + strand at 80.278 kb on + strand at 80.353 kb on + strand at 80.354 kb on - strand at 80.354 kb on - strand at 80.660 kb on + strand, within H281DRAFT_06191 at 80.661 kb on - strand, within H281DRAFT_06191 at 80.687 kb on + strand, within H281DRAFT_06191 at 80.688 kb on - strand, within H281DRAFT_06191 at 80.688 kb on - strand, within H281DRAFT_06191 at 80.691 kb on + strand, within H281DRAFT_06191 at 80.692 kb on - strand, within H281DRAFT_06191 at 80.692 kb on - strand, within H281DRAFT_06191 at 80.705 kb on - strand, within H281DRAFT_06191 at 81.033 kb on - strand at 81.033 kb on - strand at 81.188 kb on - strand, within H281DRAFT_06192 at 81.188 kb on - strand, within H281DRAFT_06192 at 81.364 kb on + strand, within H281DRAFT_06192 at 81.364 kb on + strand, within H281DRAFT_06192 at 81.364 kb on + strand, within H281DRAFT_06192 at 81.364 kb on + strand, within H281DRAFT_06192 at 81.365 kb on - strand, within H281DRAFT_06192 at 81.365 kb on - strand, within H281DRAFT_06192 at 81.365 kb on - strand, within H281DRAFT_06192 at 81.409 kb on - strand, within H281DRAFT_06192 at 81.409 kb on - strand, within H281DRAFT_06192 at 81.409 kb on - strand, within H281DRAFT_06192 at 81.409 kb on - strand, within H281DRAFT_06192 at 81.426 kb on - strand, within H281DRAFT_06192 at 81.498 kb on + strand, within H281DRAFT_06192 at 81.498 kb on + strand, within H281DRAFT_06192 at 81.498 kb on + strand, within H281DRAFT_06192 at 81.498 kb on + strand, within H281DRAFT_06192 at 81.498 kb on + strand, within H281DRAFT_06192 at 81.498 kb on + strand, within H281DRAFT_06192 at 81.498 kb on + strand, within H281DRAFT_06192 at 81.498 kb on + strand, within H281DRAFT_06192 at 81.498 kb on + strand, within H281DRAFT_06192 at 81.498 kb on + strand, within H281DRAFT_06192 at 81.499 kb on - strand, within H281DRAFT_06192 at 81.499 kb on - strand, within H281DRAFT_06192 at 81.499 kb on - strand, within H281DRAFT_06192 at 81.499 kb on - strand, within H281DRAFT_06192 at 81.499 kb on - strand, within H281DRAFT_06192 at 81.501 kb on + strand, within H281DRAFT_06192 at 81.501 kb on + strand, within H281DRAFT_06192 at 81.525 kb on + strand, within H281DRAFT_06192 at 81.525 kb on + strand, within H281DRAFT_06192 at 81.526 kb on - strand, within H281DRAFT_06192 at 81.532 kb on + strand, within H281DRAFT_06192 at 81.591 kb on - strand, within H281DRAFT_06192 at 81.700 kb on + strand, within H281DRAFT_06192 at 81.700 kb on + strand, within H281DRAFT_06192 at 81.700 kb on + strand, within H281DRAFT_06192 at 81.700 kb on + strand, within H281DRAFT_06192 at 81.700 kb on + strand, within H281DRAFT_06192 at 81.701 kb on - strand, within H281DRAFT_06192 at 81.701 kb on - strand, within H281DRAFT_06192 at 81.701 kb on - strand, within H281DRAFT_06192 at 81.702 kb on + strand, within H281DRAFT_06192 at 81.702 kb on + strand, within H281DRAFT_06192 at 81.703 kb on - strand, within H281DRAFT_06192 at 81.703 kb on - strand, within H281DRAFT_06192 at 81.837 kb on + strand at 81.838 kb on - strand at 81.958 kb on - strand at 81.975 kb on + strand at 81.975 kb on + strand at 81.976 kb on - strand at 81.992 kb on + strand at 82.007 kb on + strand at 82.008 kb on - strand at 82.039 kb on + strand at 82.039 kb on + strand at 82.105 kb on + strand at 82.105 kb on + strand at 82.116 kb on + strand at 82.318 kb on + strand at 82.332 kb on + strand, within H281DRAFT_06193 at 82.333 kb on - strand, within H281DRAFT_06193 at 82.389 kb on - strand, within H281DRAFT_06193 at 82.514 kb on + strand, within H281DRAFT_06193 at 82.515 kb on - strand, within H281DRAFT_06193 at 82.580 kb on + strand, within H281DRAFT_06193 at 82.708 kb on + strand, within H281DRAFT_06193 at 82.708 kb on + strand, within H281DRAFT_06193 at 82.708 kb on + strand, within H281DRAFT_06193 at 82.709 kb on - strand, within H281DRAFT_06193 at 82.709 kb on - strand, within H281DRAFT_06193 at 82.709 kb on - strand, within H281DRAFT_06193 at 82.754 kb on + strand, within H281DRAFT_06193 at 82.754 kb on + strand, within H281DRAFT_06193 at 82.754 kb on + strand, within H281DRAFT_06193 at 82.755 kb on - strand, within H281DRAFT_06193 at 82.755 kb on - strand, within H281DRAFT_06193
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 80,055 + H281DRAFT_06190 0.34 +0.0 80,230 + -1.3 80,230 + -0.3 80,230 + -0.0 80,232 + +0.3 80,233 - -0.2 80,264 - +0.3 80,278 + +0.6 80,278 + +0.3 80,353 + +0.6 80,354 - +0.6 80,354 - +0.2 80,660 + H281DRAFT_06191 0.67 +0.1 80,661 - H281DRAFT_06191 0.67 -0.4 80,687 + H281DRAFT_06191 0.73 +0.5 80,688 - H281DRAFT_06191 0.73 +0.4 80,688 - H281DRAFT_06191 0.73 -0.4 80,691 + H281DRAFT_06191 0.74 -1.2 80,692 - H281DRAFT_06191 0.74 +0.3 80,692 - H281DRAFT_06191 0.74 -0.1 80,705 - H281DRAFT_06191 0.77 +1.1 81,033 - +0.6 81,033 - +0.1 81,188 - H281DRAFT_06192 0.22 +0.3 81,188 - H281DRAFT_06192 0.22 +0.3 81,364 + H281DRAFT_06192 0.43 +0.0 81,364 + H281DRAFT_06192 0.43 +0.8 81,364 + H281DRAFT_06192 0.43 +0.2 81,364 + H281DRAFT_06192 0.43 +0.0 81,365 - H281DRAFT_06192 0.44 +0.1 81,365 - H281DRAFT_06192 0.44 -0.0 81,365 - H281DRAFT_06192 0.44 +0.2 81,409 - H281DRAFT_06192 0.49 -0.1 81,409 - H281DRAFT_06192 0.49 -0.8 81,409 - H281DRAFT_06192 0.49 -0.4 81,409 - H281DRAFT_06192 0.49 -0.3 81,426 - H281DRAFT_06192 0.51 +0.5 81,498 + H281DRAFT_06192 0.59 +0.3 81,498 + H281DRAFT_06192 0.59 -1.2 81,498 + H281DRAFT_06192 0.59 +0.6 81,498 + H281DRAFT_06192 0.59 +0.0 81,498 + H281DRAFT_06192 0.59 -0.2 81,498 + H281DRAFT_06192 0.59 -0.5 81,498 + H281DRAFT_06192 0.59 -0.1 81,498 + H281DRAFT_06192 0.59 +0.0 81,498 + H281DRAFT_06192 0.59 +0.7 81,498 + H281DRAFT_06192 0.59 -0.5 81,499 - H281DRAFT_06192 0.60 -0.6 81,499 - H281DRAFT_06192 0.60 +0.1 81,499 - H281DRAFT_06192 0.60 +0.5 81,499 - H281DRAFT_06192 0.60 -0.4 81,499 - H281DRAFT_06192 0.60 -1.5 81,501 + H281DRAFT_06192 0.60 -0.1 81,501 + H281DRAFT_06192 0.60 +0.1 81,525 + H281DRAFT_06192 0.63 -1.5 81,525 + H281DRAFT_06192 0.63 +0.5 81,526 - H281DRAFT_06192 0.63 -0.2 81,532 + H281DRAFT_06192 0.64 -0.8 81,591 - H281DRAFT_06192 0.71 +1.4 81,700 + H281DRAFT_06192 0.84 -0.3 81,700 + H281DRAFT_06192 0.84 +0.3 81,700 + H281DRAFT_06192 0.84 +0.7 81,700 + H281DRAFT_06192 0.84 -0.1 81,700 + H281DRAFT_06192 0.84 -0.6 81,701 - H281DRAFT_06192 0.84 -0.3 81,701 - H281DRAFT_06192 0.84 +1.1 81,701 - H281DRAFT_06192 0.84 +0.1 81,702 + H281DRAFT_06192 0.84 -0.2 81,702 + H281DRAFT_06192 0.84 -0.1 81,703 - H281DRAFT_06192 0.84 +0.8 81,703 - H281DRAFT_06192 0.84 +0.9 81,837 + -0.0 81,838 - +0.7 81,958 - +0.0 81,975 + +0.8 81,975 + +0.3 81,976 - -0.3 81,992 + +0.2 82,007 + -0.1 82,008 - -0.0 82,039 + -0.2 82,039 + +0.3 82,105 + +0.8 82,105 + +2.8 82,116 + +1.4 82,318 + +0.5 82,332 + H281DRAFT_06193 0.10 +0.7 82,333 - H281DRAFT_06193 0.10 +0.3 82,389 - H281DRAFT_06193 0.17 +1.0 82,514 + H281DRAFT_06193 0.32 -0.6 82,515 - H281DRAFT_06193 0.32 +0.5 82,580 + H281DRAFT_06193 0.40 +0.2 82,708 + H281DRAFT_06193 0.56 +0.2 82,708 + H281DRAFT_06193 0.56 +3.2 82,708 + H281DRAFT_06193 0.56 -0.6 82,709 - H281DRAFT_06193 0.56 +0.5 82,709 - H281DRAFT_06193 0.56 -0.1 82,709 - H281DRAFT_06193 0.56 -0.2 82,754 + H281DRAFT_06193 0.61 -0.2 82,754 + H281DRAFT_06193 0.61 +0.0 82,754 + H281DRAFT_06193 0.61 +0.1 82,755 - H281DRAFT_06193 0.61 +0.7 82,755 - H281DRAFT_06193 0.61 -0.1
Or see this region's nucleotide sequence