Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06130 and H281DRAFT_06131 are separated by 16 nucleotides H281DRAFT_06131 and H281DRAFT_06132 are separated by 25 nucleotides
H281DRAFT_06130: H281DRAFT_06130 - indolepyruvate ferredoxin oxidoreductase, at 16,374 to 19,904
_06130
H281DRAFT_06131: H281DRAFT_06131 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 19,921 to 20,685
_06131
H281DRAFT_06132: H281DRAFT_06132 - acetyl-CoA C-acetyltransferase, at 20,711 to 21,898
_06132
Position (kb) 19
20
21 Strain fitness (log2 ratio) -2
-1
0
1 at 19.300 kb on - strand, within H281DRAFT_06130 at 19.392 kb on - strand, within H281DRAFT_06130 at 19.413 kb on + strand, within H281DRAFT_06130 at 19.413 kb on + strand, within H281DRAFT_06130 at 19.413 kb on + strand, within H281DRAFT_06130 at 19.431 kb on + strand, within H281DRAFT_06130 at 19.444 kb on - strand, within H281DRAFT_06130 at 19.464 kb on - strand, within H281DRAFT_06130 at 19.524 kb on + strand, within H281DRAFT_06130 at 19.524 kb on + strand, within H281DRAFT_06130 at 19.525 kb on - strand, within H281DRAFT_06130 at 19.787 kb on - strand at 19.836 kb on + strand at 19.836 kb on + strand at 19.836 kb on + strand at 19.837 kb on - strand at 19.839 kb on - strand at 19.916 kb on + strand at 19.916 kb on + strand at 19.917 kb on - strand at 19.917 kb on - strand at 19.920 kb on + strand at 19.920 kb on + strand at 19.921 kb on - strand at 19.921 kb on - strand at 19.921 kb on - strand at 20.205 kb on - strand, within H281DRAFT_06131 at 20.253 kb on + strand, within H281DRAFT_06131 at 20.253 kb on + strand, within H281DRAFT_06131 at 20.346 kb on + strand, within H281DRAFT_06131 at 20.629 kb on + strand at 20.630 kb on - strand at 20.665 kb on - strand at 20.665 kb on - strand at 20.705 kb on - strand at 20.705 kb on - strand at 21.042 kb on + strand, within H281DRAFT_06132 at 21.084 kb on - strand, within H281DRAFT_06132 at 21.142 kb on + strand, within H281DRAFT_06132 at 21.142 kb on + strand, within H281DRAFT_06132 at 21.143 kb on - strand, within H281DRAFT_06132 at 21.143 kb on - strand, within H281DRAFT_06132 at 21.143 kb on - strand, within H281DRAFT_06132 at 21.143 kb on - strand, within H281DRAFT_06132 at 21.170 kb on + strand, within H281DRAFT_06132 at 21.171 kb on - strand, within H281DRAFT_06132 at 21.360 kb on + strand, within H281DRAFT_06132 at 21.360 kb on + strand, within H281DRAFT_06132 at 21.364 kb on + strand, within H281DRAFT_06132 at 21.365 kb on - strand, within H281DRAFT_06132 at 21.451 kb on + strand, within H281DRAFT_06132 at 21.452 kb on - strand, within H281DRAFT_06132 at 21.553 kb on + strand, within H281DRAFT_06132 at 21.560 kb on + strand, within H281DRAFT_06132 at 21.560 kb on + strand, within H281DRAFT_06132 at 21.560 kb on + strand, within H281DRAFT_06132 at 21.561 kb on - strand, within H281DRAFT_06132 at 21.640 kb on - strand, within H281DRAFT_06132 at 21.640 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 19,300 - H281DRAFT_06130 0.83 -0.1 19,392 - H281DRAFT_06130 0.85 +0.2 19,413 + H281DRAFT_06130 0.86 -0.2 19,413 + H281DRAFT_06130 0.86 -0.0 19,413 + H281DRAFT_06130 0.86 -0.6 19,431 + H281DRAFT_06130 0.87 -0.2 19,444 - H281DRAFT_06130 0.87 +0.9 19,464 - H281DRAFT_06130 0.88 +0.8 19,524 + H281DRAFT_06130 0.89 +0.1 19,524 + H281DRAFT_06130 0.89 +1.1 19,525 - H281DRAFT_06130 0.89 +0.0 19,787 - +0.0 19,836 + -1.2 19,836 + +0.1 19,836 + -0.1 19,837 - -1.7 19,839 - +0.8 19,916 + -0.4 19,916 + -0.0 19,917 - -0.7 19,917 - -0.9 19,920 + +0.2 19,920 + -0.4 19,921 - -1.0 19,921 - +0.6 19,921 - -1.4 20,205 - H281DRAFT_06131 0.37 -0.8 20,253 + H281DRAFT_06131 0.43 -0.5 20,253 + H281DRAFT_06131 0.43 -0.6 20,346 + H281DRAFT_06131 0.56 -1.2 20,629 + +0.9 20,630 - +0.4 20,665 - +0.2 20,665 - -0.1 20,705 - +0.1 20,705 - -0.4 21,042 + H281DRAFT_06132 0.28 +0.9 21,084 - H281DRAFT_06132 0.31 +0.6 21,142 + H281DRAFT_06132 0.36 +0.2 21,142 + H281DRAFT_06132 0.36 -0.9 21,143 - H281DRAFT_06132 0.36 -0.2 21,143 - H281DRAFT_06132 0.36 -0.5 21,143 - H281DRAFT_06132 0.36 +1.5 21,143 - H281DRAFT_06132 0.36 -0.3 21,170 + H281DRAFT_06132 0.39 -0.4 21,171 - H281DRAFT_06132 0.39 +0.0 21,360 + H281DRAFT_06132 0.55 +0.9 21,360 + H281DRAFT_06132 0.55 -2.7 21,364 + H281DRAFT_06132 0.55 -0.6 21,365 - H281DRAFT_06132 0.55 +0.5 21,451 + H281DRAFT_06132 0.62 +0.3 21,452 - H281DRAFT_06132 0.62 -0.2 21,553 + H281DRAFT_06132 0.71 -0.6 21,560 + H281DRAFT_06132 0.71 -0.2 21,560 + H281DRAFT_06132 0.71 +0.2 21,560 + H281DRAFT_06132 0.71 +0.3 21,561 - H281DRAFT_06132 0.72 +0.2 21,640 - H281DRAFT_06132 0.78 +0.2 21,640 - +0.8
Or see this region's nucleotide sequence