Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06116 and H281DRAFT_06117 are separated by 152 nucleotides H281DRAFT_06117 and H281DRAFT_06118 are separated by 72 nucleotides H281DRAFT_06118 and H281DRAFT_06119 are separated by 81 nucleotides
H281DRAFT_06116: H281DRAFT_06116 - transcriptional regulator, AraC family, at 135,994 to 137,157
_06116
H281DRAFT_06117: H281DRAFT_06117 - citrate synthase, at 137,310 to 138,611
_06117
H281DRAFT_06118: H281DRAFT_06118 - antitoxin CptB, at 138,684 to 138,956
_06118
H281DRAFT_06119: H281DRAFT_06119 - succinate dehydrogenase subunit B, at 139,038 to 139,742
_06119
Position (kb) 137
138
139 Strain fitness (log2 ratio) -1
0
1 at 136.579 kb on - strand, within H281DRAFT_06116 at 136.844 kb on - strand, within H281DRAFT_06116 at 136.844 kb on - strand, within H281DRAFT_06116 at 136.879 kb on + strand, within H281DRAFT_06116 at 136.880 kb on - strand, within H281DRAFT_06116 at 136.884 kb on - strand, within H281DRAFT_06116 at 136.884 kb on - strand, within H281DRAFT_06116 at 136.947 kb on - strand, within H281DRAFT_06116 at 137.142 kb on + strand at 137.142 kb on + strand at 137.192 kb on - strand at 137.192 kb on - strand at 137.192 kb on - strand at 137.272 kb on - strand at 137.311 kb on + strand at 138.963 kb on - strand at 138.963 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 136,579 - H281DRAFT_06116 0.50 +0.4 136,844 - H281DRAFT_06116 0.73 +0.9 136,844 - H281DRAFT_06116 0.73 +0.3 136,879 + H281DRAFT_06116 0.76 +0.2 136,880 - H281DRAFT_06116 0.76 -0.7 136,884 - H281DRAFT_06116 0.76 +0.8 136,884 - H281DRAFT_06116 0.76 -0.1 136,947 - H281DRAFT_06116 0.82 -0.5 137,142 + +0.1 137,142 + -0.3 137,192 - +0.0 137,192 - -0.0 137,192 - +0.4 137,272 - -1.7 137,311 + -0.3 138,963 - +0.7 138,963 - +0.5
Or see this region's nucleotide sequence