Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05753 and H281DRAFT_05754 are separated by 200 nucleotides H281DRAFT_05754 and H281DRAFT_05755 overlap by 8 nucleotides H281DRAFT_05755 and H281DRAFT_05756 are separated by 28 nucleotides
H281DRAFT_05753: H281DRAFT_05753 - flagellar biosynthesis protein FlhA, at 26,287 to 28,389
_05753
H281DRAFT_05754: H281DRAFT_05754 - flagellar biosynthesis protein FlhF, at 28,590 to 30,743
_05754
H281DRAFT_05755: H281DRAFT_05755 - flagellar biosynthesis protein FlhG, at 30,736 to 31,605
_05755
H281DRAFT_05756: H281DRAFT_05756 - RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG, at 31,634 to 32,368
_05756
Position (kb) 28
29
30
31 Strain fitness (log2 ratio) -1
0
1
2 at 27.730 kb on + strand, within H281DRAFT_05753 at 27.731 kb on - strand, within H281DRAFT_05753 at 28.185 kb on + strand at 28.186 kb on - strand at 28.365 kb on + strand at 28.366 kb on - strand at 28.460 kb on - strand at 28.460 kb on - strand at 28.522 kb on + strand at 28.523 kb on - strand at 28.523 kb on - strand at 28.587 kb on + strand at 28.587 kb on + strand at 28.632 kb on + strand at 28.642 kb on + strand at 28.643 kb on - strand at 28.685 kb on + strand at 28.730 kb on + strand at 28.730 kb on + strand at 28.732 kb on + strand at 28.733 kb on - strand at 28.733 kb on - strand at 28.778 kb on + strand at 28.779 kb on - strand at 28.779 kb on - strand at 29.517 kb on + strand, within H281DRAFT_05754 at 29.518 kb on - strand, within H281DRAFT_05754 at 29.518 kb on - strand, within H281DRAFT_05754 at 30.309 kb on - strand, within H281DRAFT_05754 at 30.537 kb on + strand at 30.555 kb on + strand at 30.556 kb on - strand at 30.591 kb on + strand at 30.591 kb on + strand at 30.592 kb on - strand at 30.592 kb on - strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.689 kb on - strand at 30.689 kb on - strand at 30.841 kb on - strand, within H281DRAFT_05755 at 30.841 kb on - strand at 31.229 kb on - strand, within H281DRAFT_05755 at 31.637 kb on + strand at 31.637 kb on + strand at 31.639 kb on + strand at 31.682 kb on + strand at 31.683 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 27,730 + H281DRAFT_05753 0.69 +0.4 27,731 - H281DRAFT_05753 0.69 -0.0 28,185 + +0.2 28,186 - +0.6 28,365 + +1.8 28,366 - -0.9 28,460 - +0.2 28,460 - +0.4 28,522 + -0.2 28,523 - -0.2 28,523 - -0.0 28,587 + -0.1 28,587 + -0.6 28,632 + -0.4 28,642 + +1.0 28,643 - -0.4 28,685 + +0.1 28,730 + -0.1 28,730 + -0.6 28,732 + +0.1 28,733 - +0.2 28,733 - -0.1 28,778 + -0.2 28,779 - +0.1 28,779 - -0.1 29,517 + H281DRAFT_05754 0.43 +0.6 29,518 - H281DRAFT_05754 0.43 +0.0 29,518 - H281DRAFT_05754 0.43 +0.8 30,309 - H281DRAFT_05754 0.80 +0.3 30,537 + -0.0 30,555 + +0.4 30,556 - +0.0 30,591 + -0.9 30,591 + -0.3 30,592 - -0.4 30,592 - -0.5 30,688 + +0.0 30,688 + +0.1 30,689 - +0.2 30,689 - +0.8 30,841 - H281DRAFT_05755 0.12 +0.8 30,841 - +0.2 31,229 - H281DRAFT_05755 0.57 +0.7 31,637 + -0.2 31,637 + +0.6 31,639 + +0.4 31,682 + +0.8 31,683 - +0.2
Or see this region's nucleotide sequence