Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04874 and H281DRAFT_04875 are separated by 117 nucleotides H281DRAFT_04875 and H281DRAFT_04876 are separated by 129 nucleotides H281DRAFT_04876 and H281DRAFT_04877 are separated by 34 nucleotides
H281DRAFT_04874: H281DRAFT_04874 - transcriptional regulator, LysR family, at 18,357 to 19,295
_04874
H281DRAFT_04875: H281DRAFT_04875 - Nucleoside-diphosphate-sugar epimerase, at 19,413 to 20,324
_04875
H281DRAFT_04876: H281DRAFT_04876 - hypothetical protein, at 20,454 to 20,636
_04876
H281DRAFT_04877: H281DRAFT_04877 - Predicted dithiol-disulfide oxidoreductase, DUF899 family, at 20,671 to 21,441
_04877
Position (kb) 19
20
21 Strain fitness (log2 ratio) -1
0
1 at 18.462 kb on + strand, within H281DRAFT_04874 at 19.421 kb on - strand at 19.761 kb on + strand, within H281DRAFT_04875 at 19.762 kb on - strand, within H281DRAFT_04875 at 20.375 kb on - strand at 20.524 kb on - strand, within H281DRAFT_04876 at 20.545 kb on - strand, within H281DRAFT_04876 at 20.715 kb on - strand at 20.835 kb on - strand, within H281DRAFT_04877 at 20.865 kb on + strand, within H281DRAFT_04877 at 20.867 kb on + strand, within H281DRAFT_04877 at 20.922 kb on + strand, within H281DRAFT_04877 at 21.047 kb on - strand, within H281DRAFT_04877
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 18,462 + H281DRAFT_04874 0.11 +0.8 19,421 - +0.2 19,761 + H281DRAFT_04875 0.38 +0.0 19,762 - H281DRAFT_04875 0.38 +1.0 20,375 - +0.4 20,524 - H281DRAFT_04876 0.38 +1.1 20,545 - H281DRAFT_04876 0.50 +0.1 20,715 - -0.1 20,835 - H281DRAFT_04877 0.21 +0.3 20,865 + H281DRAFT_04877 0.25 +0.2 20,867 + H281DRAFT_04877 0.25 +0.1 20,922 + H281DRAFT_04877 0.33 +0.1 21,047 - H281DRAFT_04877 0.49 -0.8
Or see this region's nucleotide sequence