Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03646 and H281DRAFT_03647 are separated by 25 nucleotides H281DRAFT_03647 and H281DRAFT_03648 are separated by 632 nucleotides
H281DRAFT_03646: H281DRAFT_03646 - 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit, at 154,902 to 156,167
_03646
H281DRAFT_03647: H281DRAFT_03647 - Sugar phosphate permease, at 156,193 to 157,596
_03647
H281DRAFT_03648: H281DRAFT_03648 - RHS repeat-associated core domain-containing protein, at 158,229 to 161,795
_03648
Position (kb) 156
157
158 Strain fitness (log2 ratio) -1
0
1 at 155.315 kb on + strand, within H281DRAFT_03646 at 156.544 kb on - strand, within H281DRAFT_03647 at 156.697 kb on + strand, within H281DRAFT_03647 at 156.697 kb on + strand, within H281DRAFT_03647 at 156.782 kb on - strand, within H281DRAFT_03647 at 156.782 kb on - strand, within H281DRAFT_03647 at 157.023 kb on + strand, within H281DRAFT_03647 at 157.024 kb on - strand, within H281DRAFT_03647 at 157.111 kb on + strand, within H281DRAFT_03647 at 157.294 kb on + strand, within H281DRAFT_03647 at 157.295 kb on - strand, within H281DRAFT_03647 at 157.295 kb on - strand, within H281DRAFT_03647 at 157.357 kb on + strand, within H281DRAFT_03647 at 157.363 kb on + strand, within H281DRAFT_03647 at 157.364 kb on - strand, within H281DRAFT_03647 at 157.378 kb on + strand, within H281DRAFT_03647 at 157.502 kb on - strand at 157.622 kb on + strand at 157.747 kb on + strand at 157.923 kb on - strand at 157.923 kb on - strand at 157.994 kb on - strand at 158.161 kb on - strand at 158.181 kb on + strand at 158.355 kb on + strand at 158.357 kb on + strand at 158.357 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 155,315 + H281DRAFT_03646 0.33 +0.2 156,544 - H281DRAFT_03647 0.25 -1.7 156,697 + H281DRAFT_03647 0.36 +0.3 156,697 + H281DRAFT_03647 0.36 -0.5 156,782 - H281DRAFT_03647 0.42 -0.3 156,782 - H281DRAFT_03647 0.42 +0.2 157,023 + H281DRAFT_03647 0.59 -0.1 157,024 - H281DRAFT_03647 0.59 +0.4 157,111 + H281DRAFT_03647 0.65 -0.6 157,294 + H281DRAFT_03647 0.78 -0.4 157,295 - H281DRAFT_03647 0.78 -0.7 157,295 - H281DRAFT_03647 0.78 -0.5 157,357 + H281DRAFT_03647 0.83 -0.2 157,363 + H281DRAFT_03647 0.83 -0.1 157,364 - H281DRAFT_03647 0.83 -1.0 157,378 + H281DRAFT_03647 0.84 +0.5 157,502 - -0.6 157,622 + +0.4 157,747 + -0.5 157,923 - +0.2 157,923 - -0.6 157,994 - +0.6 158,161 - +0.0 158,181 + +0.1 158,355 + +0.4 158,357 + -1.3 158,357 + -0.4
Or see this region's nucleotide sequence