Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03347 and H281DRAFT_03348 overlap by 4 nucleotides H281DRAFT_03348 and H281DRAFT_03349 overlap by 4 nucleotides H281DRAFT_03349 and H281DRAFT_03350 are separated by 17 nucleotides H281DRAFT_03350 and H281DRAFT_03351 are separated by 86 nucleotides
H281DRAFT_03347: H281DRAFT_03347 - formiminoglutamase, at 406,657 to 407,625
_03347
H281DRAFT_03348: H281DRAFT_03348 - amino acid ABC transporter ATP-binding protein, PAAT family, at 407,622 to 408,398
_03348
H281DRAFT_03349: H281DRAFT_03349 - amino acid ABC transporter membrane protein, PAAT family, at 408,395 to 409,063
_03349
H281DRAFT_03350: H281DRAFT_03350 - amino acid ABC transporter substrate-binding protein, PAAT family, at 409,081 to 409,836
_03350
H281DRAFT_03351: H281DRAFT_03351 - transcriptional regulator, IclR family, at 409,923 to 410,687
_03351
Position (kb) 408
409
410 Strain fitness (log2 ratio) -1
0
1 at 408.065 kb on + strand, within H281DRAFT_03348 at 408.227 kb on + strand, within H281DRAFT_03348 at 408.475 kb on - strand, within H281DRAFT_03349 at 408.496 kb on - strand, within H281DRAFT_03349 at 409.125 kb on - strand at 409.209 kb on - strand, within H281DRAFT_03350 at 409.238 kb on - strand, within H281DRAFT_03350 at 409.238 kb on - strand, within H281DRAFT_03350 at 409.500 kb on - strand, within H281DRAFT_03350 at 409.544 kb on + strand, within H281DRAFT_03350 at 409.544 kb on + strand, within H281DRAFT_03350 at 409.544 kb on + strand, within H281DRAFT_03350 at 409.545 kb on - strand, within H281DRAFT_03350 at 409.938 kb on - strand at 409.965 kb on + strand at 409.966 kb on - strand at 409.966 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 408,065 + H281DRAFT_03348 0.57 +0.6 408,227 + H281DRAFT_03348 0.78 +1.1 408,475 - H281DRAFT_03349 0.12 +1.2 408,496 - H281DRAFT_03349 0.15 +0.2 409,125 - +0.2 409,209 - H281DRAFT_03350 0.17 -0.4 409,238 - H281DRAFT_03350 0.21 +0.1 409,238 - H281DRAFT_03350 0.21 +0.0 409,500 - H281DRAFT_03350 0.55 -0.8 409,544 + H281DRAFT_03350 0.61 -0.7 409,544 + H281DRAFT_03350 0.61 -0.0 409,544 + H281DRAFT_03350 0.61 +0.9 409,545 - H281DRAFT_03350 0.61 -0.5 409,938 - +0.1 409,965 + +0.9 409,966 - -0.0 409,966 - -0.9
Or see this region's nucleotide sequence