Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03346 and H281DRAFT_03347 are separated by 140 nucleotides H281DRAFT_03347 and H281DRAFT_03348 overlap by 4 nucleotides H281DRAFT_03348 and H281DRAFT_03349 overlap by 4 nucleotides
H281DRAFT_03346: H281DRAFT_03346 - Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family, at 405,644 to 406,516
_03346
H281DRAFT_03347: H281DRAFT_03347 - formiminoglutamase, at 406,657 to 407,625
_03347
H281DRAFT_03348: H281DRAFT_03348 - amino acid ABC transporter ATP-binding protein, PAAT family, at 407,622 to 408,398
_03348
H281DRAFT_03349: H281DRAFT_03349 - amino acid ABC transporter membrane protein, PAAT family, at 408,395 to 409,063
_03349
Position (kb) 406
407
408 Strain fitness (log2 ratio) -1
0
1 at 405.940 kb on + strand, within H281DRAFT_03346 at 406.572 kb on + strand at 406.728 kb on - strand at 406.878 kb on - strand, within H281DRAFT_03347 at 406.879 kb on + strand, within H281DRAFT_03347 at 406.879 kb on + strand, within H281DRAFT_03347 at 406.879 kb on + strand, within H281DRAFT_03347 at 406.879 kb on + strand, within H281DRAFT_03347 at 406.957 kb on + strand at 406.996 kb on + strand, within H281DRAFT_03347 at 407.039 kb on + strand, within H281DRAFT_03347 at 407.039 kb on + strand, within H281DRAFT_03347 at 407.040 kb on - strand, within H281DRAFT_03347 at 408.065 kb on + strand, within H281DRAFT_03348 at 408.227 kb on + strand, within H281DRAFT_03348 at 408.475 kb on - strand, within H281DRAFT_03349 at 408.496 kb on - strand, within H281DRAFT_03349
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 405,940 + H281DRAFT_03346 0.34 +0.7 406,572 + -0.4 406,728 - +1.1 406,878 - H281DRAFT_03347 0.23 -0.3 406,879 + H281DRAFT_03347 0.23 -0.2 406,879 + H281DRAFT_03347 0.23 -0.5 406,879 + H281DRAFT_03347 0.23 +1.2 406,879 + H281DRAFT_03347 0.23 -0.0 406,957 + -1.0 406,996 + H281DRAFT_03347 0.35 +0.0 407,039 + H281DRAFT_03347 0.39 +0.6 407,039 + H281DRAFT_03347 0.39 -0.2 407,040 - H281DRAFT_03347 0.40 -0.5 408,065 + H281DRAFT_03348 0.57 +0.6 408,227 + H281DRAFT_03348 0.78 +1.1 408,475 - H281DRAFT_03349 0.12 +1.2 408,496 - H281DRAFT_03349 0.15 +0.2
Or see this region's nucleotide sequence