Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03249 and H281DRAFT_03250 are separated by 23 nucleotides H281DRAFT_03250 and H281DRAFT_03251 overlap by 4 nucleotides H281DRAFT_03251 and H281DRAFT_03252 are separated by 99 nucleotides H281DRAFT_03252 and H281DRAFT_03253 are separated by 8 nucleotides H281DRAFT_03253 and H281DRAFT_03254 are separated by 42 nucleotides
H281DRAFT_03249: H281DRAFT_03249 - hypothetical protein, at 307,630 to 308,046
_03249
H281DRAFT_03250: H281DRAFT_03250 - Uncharacterized conserved protein YndB, AHSA1/START domain, at 308,070 to 308,597
_03250
H281DRAFT_03251: H281DRAFT_03251 - transcriptional regulator, ArsR family, at 308,594 to 308,929
_03251
H281DRAFT_03252: H281DRAFT_03252 - 2,4-dihydroxyhept-2-enedioate aldolase (EC 4.1.2.-), at 309,029 to 309,832
_03252
H281DRAFT_03253: H281DRAFT_03253 - 2-oxohept-3-enedioate hydratase, at 309,841 to 310,644
_03253
H281DRAFT_03254: H281DRAFT_03254 - 5-carboxymethyl-2-hydroxymuconate isomerase, at 310,687 to 311,088
_03254
Position (kb) 309
310 Strain fitness (log2 ratio) -1
0
1 at 308.248 kb on - strand, within H281DRAFT_03250 at 308.930 kb on - strand at 309.030 kb on + strand at 309.075 kb on + strand at 309.075 kb on + strand at 309.159 kb on + strand, within H281DRAFT_03252 at 309.555 kb on - strand, within H281DRAFT_03252 at 309.839 kb on - strand at 310.161 kb on + strand, within H281DRAFT_03253 at 310.161 kb on + strand, within H281DRAFT_03253 at 310.170 kb on - strand, within H281DRAFT_03253 at 310.381 kb on - strand, within H281DRAFT_03253 at 310.381 kb on - strand, within H281DRAFT_03253
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 308,248 - H281DRAFT_03250 0.34 -0.6 308,930 - -0.9 309,030 + -0.4 309,075 + +1.1 309,075 + +0.0 309,159 + H281DRAFT_03252 0.16 +0.6 309,555 - H281DRAFT_03252 0.65 +0.8 309,839 - -0.1 310,161 + H281DRAFT_03253 0.40 -0.5 310,161 + H281DRAFT_03253 0.40 -0.6 310,170 - H281DRAFT_03253 0.41 -0.6 310,381 - H281DRAFT_03253 0.67 +0.2 310,381 - H281DRAFT_03253 0.67 +0.6
Or see this region's nucleotide sequence