Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02815 and H281DRAFT_02816 overlap by 4 nucleotides H281DRAFT_02816 and H281DRAFT_02817 are separated by 207 nucleotides
H281DRAFT_02814: H281DRAFT_02814 - xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC 1.17.1.4), at 404,223 to 406,472
_02814
H281DRAFT_02815: H281DRAFT_02815 - xanthine dehydrogenase YagS FAD-binding subunit, at 406,469 to 407,473
_02815
H281DRAFT_02816: H281DRAFT_02816 - xanthine dehydrogenase YagT iron-sulfur-binding subunit, at 407,470 to 408,012
_02816
H281DRAFT_02817: H281DRAFT_02817 - hypothetical protein, at 408,220 to 409,086
_02817
Position (kb) 407
408
409 Strain fitness (log2 ratio) -1
0
1 at 406.764 kb on + strand, within H281DRAFT_02815 at 406.765 kb on - strand, within H281DRAFT_02815 at 406.791 kb on + strand, within H281DRAFT_02815 at 406.791 kb on + strand, within H281DRAFT_02815 at 406.791 kb on + strand, within H281DRAFT_02815 at 406.791 kb on + strand, within H281DRAFT_02815 at 406.792 kb on - strand, within H281DRAFT_02815 at 406.792 kb on - strand, within H281DRAFT_02815 at 407.052 kb on - strand, within H281DRAFT_02815 at 407.113 kb on - strand, within H281DRAFT_02815 at 407.544 kb on - strand, within H281DRAFT_02816 at 408.221 kb on + strand at 408.270 kb on - strand at 408.270 kb on - strand at 408.677 kb on + strand, within H281DRAFT_02817 at 408.678 kb on - strand, within H281DRAFT_02817 at 408.689 kb on + strand, within H281DRAFT_02817 at 408.689 kb on + strand, within H281DRAFT_02817
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 406,764 + H281DRAFT_02815 0.29 -0.6 406,765 - H281DRAFT_02815 0.29 -0.3 406,791 + H281DRAFT_02815 0.32 -0.3 406,791 + H281DRAFT_02815 0.32 +0.9 406,791 + H281DRAFT_02815 0.32 -0.2 406,791 + H281DRAFT_02815 0.32 +1.4 406,792 - H281DRAFT_02815 0.32 -0.4 406,792 - H281DRAFT_02815 0.32 -0.6 407,052 - H281DRAFT_02815 0.58 +0.8 407,113 - H281DRAFT_02815 0.64 +0.5 407,544 - H281DRAFT_02816 0.14 -0.7 408,221 + -1.0 408,270 - -0.5 408,270 - +0.3 408,677 + H281DRAFT_02817 0.53 +0.6 408,678 - H281DRAFT_02817 0.53 -0.1 408,689 + H281DRAFT_02817 0.54 +0.5 408,689 + H281DRAFT_02817 0.54 +0.2
Or see this region's nucleotide sequence