Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01824 and H281DRAFT_01825 are separated by 87 nucleotides H281DRAFT_01825 and H281DRAFT_01826 are separated by 884 nucleotides
H281DRAFT_01824: H281DRAFT_01824 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 729,080 to 730,639
_01824
H281DRAFT_01825: H281DRAFT_01825 - Outer membrane protein (porin), at 730,727 to 731,869
_01825
H281DRAFT_01826: H281DRAFT_01826 - hypothetical protein, at 732,754 to 732,903
_01826
Position (kb)
730
731
732 Strain fitness (log2 ratio)
-2
-1
0
1 at 729.797 kb on - strand, within H281DRAFT_01824 at 730.201 kb on + strand, within H281DRAFT_01824 at 730.202 kb on - strand, within H281DRAFT_01824 at 730.394 kb on - strand, within H281DRAFT_01824 at 730.411 kb on - strand at 730.411 kb on - strand, within H281DRAFT_01824 at 730.411 kb on - strand, within H281DRAFT_01824 at 730.729 kb on - strand at 730.729 kb on - strand at 731.039 kb on - strand, within H281DRAFT_01825 at 731.377 kb on - strand, within H281DRAFT_01825 at 731.377 kb on - strand, within H281DRAFT_01825 at 731.464 kb on - strand, within H281DRAFT_01825 at 731.630 kb on - strand, within H281DRAFT_01825 at 731.855 kb on - strand at 731.855 kb on - strand at 731.855 kb on - strand at 732.086 kb on - strand at 732.250 kb on + strand at 732.250 kb on + strand at 732.251 kb on - strand at 732.251 kb on - strand at 732.251 kb on - strand at 732.261 kb on + strand at 732.284 kb on + strand at 732.285 kb on - strand at 732.323 kb on + strand at 732.358 kb on - strand at 732.408 kb on + strand at 732.408 kb on + strand at 732.409 kb on - strand at 732.409 kb on - strand at 732.529 kb on + strand at 732.530 kb on - strand at 732.533 kb on + strand at 732.533 kb on + strand at 732.533 kb on + strand at 732.534 kb on - strand at 732.534 kb on - strand at 732.537 kb on + strand at 732.537 kb on + strand at 732.538 kb on - strand at 732.547 kb on + strand at 732.548 kb on - strand at 732.548 kb on - strand at 732.550 kb on + strand at 732.550 kb on + strand at 732.551 kb on - strand at 732.551 kb on - strand at 732.660 kb on + strand at 732.661 kb on - strand at 732.666 kb on - strand at 732.666 kb on - strand at 732.689 kb on + strand at 732.695 kb on + strand at 732.695 kb on + strand at 732.695 kb on + strand at 732.695 kb on + strand at 732.696 kb on - strand at 732.696 kb on - strand at 732.696 kb on - strand at 732.696 kb on - strand at 732.696 kb on - strand at 732.755 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 729,797 - H281DRAFT_01824 0.46 +0.2 730,201 + H281DRAFT_01824 0.72 +0.2 730,202 - H281DRAFT_01824 0.72 -1.5 730,394 - H281DRAFT_01824 0.84 +0.4 730,411 - -0.9 730,411 - H281DRAFT_01824 0.85 +1.2 730,411 - H281DRAFT_01824 0.85 +0.4 730,729 - +1.5 730,729 - +1.7 731,039 - H281DRAFT_01825 0.27 -0.1 731,377 - H281DRAFT_01825 0.57 -0.8 731,377 - H281DRAFT_01825 0.57 -0.4 731,464 - H281DRAFT_01825 0.64 -0.1 731,630 - H281DRAFT_01825 0.79 +0.2 731,855 - +0.7 731,855 - -0.3 731,855 - -0.4 732,086 - -0.2 732,250 + -0.0 732,250 + +0.0 732,251 - +1.0 732,251 - +0.5 732,251 - +0.4 732,261 + +0.0 732,284 + +0.4 732,285 - +0.6 732,323 + +0.6 732,358 - +0.0 732,408 + +0.7 732,408 + -0.1 732,409 - -0.3 732,409 - -0.0 732,529 + -2.0 732,530 - +0.3 732,533 + +0.1 732,533 + +0.3 732,533 + +0.3 732,534 - +0.5 732,534 - -2.3 732,537 + -0.5 732,537 + +0.1 732,538 - +0.1 732,547 + -0.5 732,548 - +0.3 732,548 - -0.2 732,550 + +0.3 732,550 + -0.4 732,551 - +0.0 732,551 - -0.2 732,660 + -0.1 732,661 - +0.5 732,666 - +0.3 732,666 - +0.3 732,689 + +0.3 732,695 + -0.2 732,695 + -0.2 732,695 + +0.8 732,695 + +0.5 732,696 - +0.1 732,696 - -0.1 732,696 - +0.1 732,696 - +0.5 732,696 - -0.2 732,755 + +0.5
Or see this region's nucleotide sequence