Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01823 and H281DRAFT_01824 are separated by 185 nucleotides H281DRAFT_01824 and H281DRAFT_01825 are separated by 87 nucleotides
H281DRAFT_01823: H281DRAFT_01823 - transcriptional regulator, LysR family, at 727,998 to 728,894
_01823
H281DRAFT_01824: H281DRAFT_01824 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 729,080 to 730,639
_01824
H281DRAFT_01825: H281DRAFT_01825 - Outer membrane protein (porin), at 730,727 to 731,869
_01825
Position (kb) 729
730
731 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 728.167 kb on + strand, within H281DRAFT_01823 at 728.167 kb on + strand, within H281DRAFT_01823 at 728.196 kb on + strand, within H281DRAFT_01823 at 728.197 kb on - strand, within H281DRAFT_01823 at 728.477 kb on + strand, within H281DRAFT_01823 at 728.478 kb on - strand, within H281DRAFT_01823 at 728.834 kb on + strand at 728.893 kb on - strand at 729.019 kb on + strand at 729.020 kb on - strand at 729.020 kb on - strand at 729.020 kb on - strand at 729.044 kb on + strand at 729.044 kb on + strand at 729.045 kb on - strand at 729.108 kb on + strand at 729.109 kb on - strand at 729.109 kb on - strand at 729.156 kb on + strand at 729.178 kb on + strand at 729.179 kb on - strand at 729.347 kb on + strand, within H281DRAFT_01824 at 729.348 kb on - strand, within H281DRAFT_01824 at 729.455 kb on + strand, within H281DRAFT_01824 at 729.500 kb on + strand, within H281DRAFT_01824 at 729.500 kb on + strand, within H281DRAFT_01824 at 729.501 kb on - strand, within H281DRAFT_01824 at 729.501 kb on - strand, within H281DRAFT_01824 at 729.510 kb on - strand, within H281DRAFT_01824 at 729.605 kb on + strand, within H281DRAFT_01824 at 729.605 kb on + strand, within H281DRAFT_01824 at 729.605 kb on + strand, within H281DRAFT_01824 at 729.606 kb on - strand, within H281DRAFT_01824 at 729.633 kb on - strand, within H281DRAFT_01824 at 729.633 kb on - strand, within H281DRAFT_01824 at 729.678 kb on + strand, within H281DRAFT_01824 at 729.679 kb on - strand, within H281DRAFT_01824 at 729.797 kb on - strand, within H281DRAFT_01824 at 730.201 kb on + strand, within H281DRAFT_01824 at 730.202 kb on - strand, within H281DRAFT_01824 at 730.394 kb on - strand, within H281DRAFT_01824 at 730.411 kb on - strand at 730.411 kb on - strand, within H281DRAFT_01824 at 730.411 kb on - strand, within H281DRAFT_01824 at 730.729 kb on - strand at 730.729 kb on - strand at 731.039 kb on - strand, within H281DRAFT_01825 at 731.377 kb on - strand, within H281DRAFT_01825 at 731.377 kb on - strand, within H281DRAFT_01825 at 731.464 kb on - strand, within H281DRAFT_01825 at 731.630 kb on - strand, within H281DRAFT_01825
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 728,167 + H281DRAFT_01823 0.19 -0.1 728,167 + H281DRAFT_01823 0.19 +0.2 728,196 + H281DRAFT_01823 0.22 +0.3 728,197 - H281DRAFT_01823 0.22 +0.3 728,477 + H281DRAFT_01823 0.53 +0.3 728,478 - H281DRAFT_01823 0.54 -0.2 728,834 + -0.2 728,893 - +0.3 729,019 + +2.8 729,020 - +0.1 729,020 - -0.6 729,020 - -0.9 729,044 + -0.2 729,044 + +0.7 729,045 - +0.4 729,108 + -0.2 729,109 - -1.8 729,109 - +0.8 729,156 + -0.5 729,178 + +0.4 729,179 - -0.1 729,347 + H281DRAFT_01824 0.17 +0.2 729,348 - H281DRAFT_01824 0.17 +0.5 729,455 + H281DRAFT_01824 0.24 -1.2 729,500 + H281DRAFT_01824 0.27 -0.1 729,500 + H281DRAFT_01824 0.27 +0.7 729,501 - H281DRAFT_01824 0.27 +0.6 729,501 - H281DRAFT_01824 0.27 -0.5 729,510 - H281DRAFT_01824 0.28 -0.1 729,605 + H281DRAFT_01824 0.34 +0.0 729,605 + H281DRAFT_01824 0.34 -0.0 729,605 + H281DRAFT_01824 0.34 +0.1 729,606 - H281DRAFT_01824 0.34 +0.1 729,633 - H281DRAFT_01824 0.35 +0.1 729,633 - H281DRAFT_01824 0.35 -0.3 729,678 + H281DRAFT_01824 0.38 -1.1 729,679 - H281DRAFT_01824 0.38 +0.2 729,797 - H281DRAFT_01824 0.46 +0.2 730,201 + H281DRAFT_01824 0.72 +0.2 730,202 - H281DRAFT_01824 0.72 -1.5 730,394 - H281DRAFT_01824 0.84 +0.4 730,411 - -0.9 730,411 - H281DRAFT_01824 0.85 +1.2 730,411 - H281DRAFT_01824 0.85 +0.4 730,729 - +1.5 730,729 - +1.7 731,039 - H281DRAFT_01825 0.27 -0.1 731,377 - H281DRAFT_01825 0.57 -0.8 731,377 - H281DRAFT_01825 0.57 -0.4 731,464 - H281DRAFT_01825 0.64 -0.1 731,630 - H281DRAFT_01825 0.79 +0.2
Or see this region's nucleotide sequence