Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01658 and H281DRAFT_01659 are separated by 16 nucleotides H281DRAFT_01659 and H281DRAFT_01660 are separated by 87 nucleotides H281DRAFT_01660 and H281DRAFT_01661 are separated by 303 nucleotides
H281DRAFT_01658: H281DRAFT_01658 - amidase, at 538,676 to 539,818
_01658
H281DRAFT_01659: H281DRAFT_01659 - 3-oxoacyl-[acyl-carrier protein] reductase, at 539,835 to 540,578
_01659
H281DRAFT_01660: H281DRAFT_01660 - 4-hydroxyphenylacetate 3-monooxygenase reductase component (EC 1.14.13.3), at 540,666 to 541,211
_01660
H281DRAFT_01661: H281DRAFT_01661 - DNA-binding transcriptional regulator, LysR family, at 541,515 to 542,420
_01661
Position (kb) 539
540
541 Strain fitness (log2 ratio) -1
0
1 at 538.883 kb on - strand, within H281DRAFT_01658 at 538.883 kb on - strand, within H281DRAFT_01658 at 538.960 kb on + strand, within H281DRAFT_01658 at 539.354 kb on + strand, within H281DRAFT_01658 at 539.690 kb on - strand, within H281DRAFT_01658 at 540.155 kb on - strand, within H281DRAFT_01659 at 540.291 kb on + strand, within H281DRAFT_01659 at 540.604 kb on - strand at 540.901 kb on + strand, within H281DRAFT_01660 at 540.901 kb on + strand, within H281DRAFT_01660 at 540.902 kb on - strand, within H281DRAFT_01660 at 540.902 kb on - strand, within H281DRAFT_01660 at 540.902 kb on - strand, within H281DRAFT_01660 at 541.152 kb on + strand, within H281DRAFT_01660 at 541.554 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 538,883 - H281DRAFT_01658 0.18 -0.4 538,883 - H281DRAFT_01658 0.18 -0.0 538,960 + H281DRAFT_01658 0.25 +0.1 539,354 + H281DRAFT_01658 0.59 +0.7 539,690 - H281DRAFT_01658 0.89 -0.7 540,155 - H281DRAFT_01659 0.43 +0.4 540,291 + H281DRAFT_01659 0.61 +1.2 540,604 - +0.1 540,901 + H281DRAFT_01660 0.43 +0.4 540,901 + H281DRAFT_01660 0.43 -0.3 540,902 - H281DRAFT_01660 0.43 +0.3 540,902 - H281DRAFT_01660 0.43 +0.6 540,902 - H281DRAFT_01660 0.43 -0.0 541,152 + H281DRAFT_01660 0.89 -0.1 541,554 + +1.5
Or see this region's nucleotide sequence