Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01061
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,191,921 | + | H281DRAFT_01060 | 0.58 | +0.3 | |
1,191,922 | - | H281DRAFT_01060 | 0.58 | -0.1 | |
1,192,135 | + | H281DRAFT_01060 | 0.70 | +0.7 | |
1,192,138 | + | H281DRAFT_01060 | 0.70 | -0.6 | |
1,192,163 | - | H281DRAFT_01060 | 0.71 | +0.7 | |
1,192,234 | - | H281DRAFT_01060 | 0.75 | +0.1 | |
1,192,272 | + | H281DRAFT_01060 | 0.77 | +0.3 | |
1,192,399 | - | H281DRAFT_01060 | 0.84 | +0.6 | |
1,192,401 | + | H281DRAFT_01060 | 0.84 | +0.0 | |
1,192,402 | - | H281DRAFT_01060 | 0.84 | +0.1 | |
1,192,521 | - | -0.3 | |||
1,192,524 | - | -0.5 | |||
1,192,598 | + | -1.0 | |||
1,192,614 | + | -0.4 | |||
1,192,641 | + | +0.5 | |||
1,192,738 | + | H281DRAFT_01061 | 0.21 | -1.1 | |
1,192,810 | + | H281DRAFT_01061 | 0.62 | -0.4 | |
1,192,811 | - | H281DRAFT_01061 | 0.63 | +0.2 | |
1,192,860 | + | -0.0 | |||
1,192,860 | + | -0.2 | |||
1,192,999 | + | -0.0 | |||
1,192,999 | + | -0.2 | |||
1,193,094 | - | H281DRAFT_01062 | 0.15 | -0.6 | |
1,193,312 | + | H281DRAFT_01062 | 0.51 | -0.6 | |
1,193,379 | + | H281DRAFT_01062 | 0.62 | +0.1 | |
1,193,466 | + | H281DRAFT_01062 | 0.77 | -1.0 | |
1,193,536 | - | H281DRAFT_01062 | 0.88 | +0.8 | |
1,193,596 | + | -0.5 |
Or see this region's nucleotide sequence