Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01058 and H281DRAFT_01059 are separated by 213 nucleotides H281DRAFT_01059 and H281DRAFT_01060 are separated by 199 nucleotides
H281DRAFT_01058: H281DRAFT_01058 - monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-), at 1,188,337 to 1,189,491
_01058
H281DRAFT_01059: H281DRAFT_01059 - Predicted transcriptional regulators, at 1,189,705 to 1,190,628
_01059
H281DRAFT_01060: H281DRAFT_01060 - KUP system potassium uptake protein, at 1,190,828 to 1,192,705
_01060
Position (kb) 1189
1190
1191 Strain fitness (log2 ratio) -2
-1
0
1 at 1188.763 kb on - strand, within H281DRAFT_01058 at 1188.771 kb on - strand, within H281DRAFT_01058 at 1189.404 kb on - strand at 1189.645 kb on - strand at 1189.658 kb on - strand at 1189.868 kb on - strand at 1189.926 kb on - strand, within H281DRAFT_01059 at 1189.926 kb on - strand, within H281DRAFT_01059 at 1189.926 kb on - strand, within H281DRAFT_01059 at 1189.929 kb on + strand, within H281DRAFT_01059 at 1189.929 kb on + strand, within H281DRAFT_01059 at 1190.125 kb on - strand, within H281DRAFT_01059 at 1190.267 kb on - strand, within H281DRAFT_01059 at 1190.291 kb on + strand, within H281DRAFT_01059 at 1190.623 kb on + strand at 1190.623 kb on + strand at 1191.054 kb on - strand, within H281DRAFT_01060 at 1191.081 kb on + strand, within H281DRAFT_01060 at 1191.205 kb on + strand, within H281DRAFT_01060
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,188,763 - H281DRAFT_01058 0.37 +0.6 1,188,771 - H281DRAFT_01058 0.38 -0.2 1,189,404 - +0.1 1,189,645 - -1.0 1,189,658 - +0.1 1,189,868 - -0.6 1,189,926 - H281DRAFT_01059 0.24 -0.5 1,189,926 - H281DRAFT_01059 0.24 +0.9 1,189,926 - H281DRAFT_01059 0.24 +0.3 1,189,929 + H281DRAFT_01059 0.24 +0.1 1,189,929 + H281DRAFT_01059 0.24 +0.6 1,190,125 - H281DRAFT_01059 0.45 -0.8 1,190,267 - H281DRAFT_01059 0.61 +0.7 1,190,291 + H281DRAFT_01059 0.63 +1.6 1,190,623 + +0.1 1,190,623 + -1.8 1,191,054 - H281DRAFT_01060 0.12 +0.5 1,191,081 + H281DRAFT_01060 0.13 -0.4 1,191,205 + H281DRAFT_01060 0.20 -0.1
Or see this region's nucleotide sequence