Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00846 and H281DRAFT_00847 are separated by 130 nucleotides H281DRAFT_00847 and H281DRAFT_00848 are separated by 38 nucleotides
H281DRAFT_00846: H281DRAFT_00846 - 23S rRNA m(5)U-1939 methyltransferase, at 935,026 to 936,456
_00846
H281DRAFT_00847: H281DRAFT_00847 - Beta-barrel assembly machine subunit BamD, at 936,587 to 937,447
_00847
H281DRAFT_00848: H281DRAFT_00848 - ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-), at 937,486 to 938,763
_00848
Position (kb) 936
937
938 Strain fitness (log2 ratio) -2
-1
0
1 at 935.589 kb on + strand, within H281DRAFT_00846 at 935.870 kb on - strand, within H281DRAFT_00846 at 935.870 kb on - strand, within H281DRAFT_00846 at 935.885 kb on - strand, within H281DRAFT_00846 at 935.967 kb on - strand, within H281DRAFT_00846 at 936.062 kb on + strand, within H281DRAFT_00846 at 936.062 kb on + strand, within H281DRAFT_00846 at 936.062 kb on + strand, within H281DRAFT_00846 at 936.063 kb on - strand, within H281DRAFT_00846 at 936.063 kb on - strand, within H281DRAFT_00846 at 936.063 kb on - strand, within H281DRAFT_00846 at 936.303 kb on + strand, within H281DRAFT_00846 at 936.304 kb on - strand, within H281DRAFT_00846 at 936.304 kb on - strand, within H281DRAFT_00846 at 936.310 kb on + strand, within H281DRAFT_00846 at 936.310 kb on + strand, within H281DRAFT_00846 at 936.311 kb on - strand, within H281DRAFT_00846 at 936.491 kb on + strand at 936.492 kb on - strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.537 kb on - strand at 936.588 kb on + strand at 936.589 kb on - strand at 936.639 kb on + strand at 937.464 kb on - strand at 937.501 kb on - strand at 937.544 kb on - strand at 937.544 kb on - strand at 937.544 kb on - strand at 937.545 kb on + strand at 937.550 kb on + strand at 937.550 kb on + strand at 937.551 kb on - strand at 938.440 kb on + strand, within H281DRAFT_00848 at 938.441 kb on - strand, within H281DRAFT_00848
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 935,589 + H281DRAFT_00846 0.39 -0.3 935,870 - H281DRAFT_00846 0.59 +0.1 935,870 - H281DRAFT_00846 0.59 +1.6 935,885 - H281DRAFT_00846 0.60 -0.7 935,967 - H281DRAFT_00846 0.66 +0.0 936,062 + H281DRAFT_00846 0.72 -0.1 936,062 + H281DRAFT_00846 0.72 -0.1 936,062 + H281DRAFT_00846 0.72 -1.7 936,063 - H281DRAFT_00846 0.72 -0.6 936,063 - H281DRAFT_00846 0.72 -0.6 936,063 - H281DRAFT_00846 0.72 +0.2 936,303 + H281DRAFT_00846 0.89 +0.5 936,304 - H281DRAFT_00846 0.89 +0.4 936,304 - H281DRAFT_00846 0.89 -0.7 936,310 + H281DRAFT_00846 0.90 -0.0 936,310 + H281DRAFT_00846 0.90 +0.5 936,311 - H281DRAFT_00846 0.90 -0.4 936,491 + +0.0 936,492 - +0.4 936,536 + -2.2 936,536 + +0.0 936,536 + +0.3 936,536 + +0.1 936,536 + -0.1 936,537 - -0.4 936,588 + +0.5 936,589 - -0.0 936,639 + -0.2 937,464 - -1.0 937,501 - -1.0 937,544 - +0.2 937,544 - +0.2 937,544 - +0.1 937,545 + +0.6 937,550 + -1.4 937,550 + -0.4 937,551 - +0.4 938,440 + H281DRAFT_00848 0.75 -1.9 938,441 - H281DRAFT_00848 0.75 -1.7
Or see this region's nucleotide sequence