Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00583 and H281DRAFT_00584 overlap by 4 nucleotides H281DRAFT_00584 and H281DRAFT_00585 overlap by 14 nucleotides H281DRAFT_00585 and H281DRAFT_00586 overlap by 4 nucleotides
H281DRAFT_00583: H281DRAFT_00583 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 650,412 to 651,215
_00583
H281DRAFT_00584: H281DRAFT_00584 - [SSU ribosomal protein S18P]-alanine acetyltransferase, at 651,212 to 651,706
_00584
H281DRAFT_00585: H281DRAFT_00585 - DNA polymerase, at 651,693 to 652,901
_00585
H281DRAFT_00586: H281DRAFT_00586 - hypothetical protein, at 652,898 to 653,995
_00586
Position (kb) 651
652
653 Strain fitness (log2 ratio) -1
0
1 at 651.239 kb on + strand at 651.239 kb on + strand at 651.350 kb on + strand, within H281DRAFT_00584 at 651.395 kb on + strand, within H281DRAFT_00584 at 651.508 kb on + strand, within H281DRAFT_00584 at 651.578 kb on + strand, within H281DRAFT_00584 at 651.621 kb on - strand, within H281DRAFT_00584 at 652.854 kb on - strand at 653.119 kb on + strand, within H281DRAFT_00586 at 653.356 kb on - strand, within H281DRAFT_00586 at 653.356 kb on - strand, within H281DRAFT_00586 at 653.405 kb on + strand, within H281DRAFT_00586 at 653.489 kb on + strand, within H281DRAFT_00586 at 653.489 kb on + strand, within H281DRAFT_00586 at 653.489 kb on + strand, within H281DRAFT_00586 at 653.489 kb on + strand, within H281DRAFT_00586 at 653.490 kb on - strand, within H281DRAFT_00586 at 653.639 kb on + strand, within H281DRAFT_00586 at 653.795 kb on + strand, within H281DRAFT_00586 at 653.796 kb on - strand, within H281DRAFT_00586 at 653.796 kb on - strand, within H281DRAFT_00586 at 653.884 kb on + strand, within H281DRAFT_00586
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 651,239 + +0.5 651,239 + -0.2 651,350 + H281DRAFT_00584 0.28 -1.1 651,395 + H281DRAFT_00584 0.37 -0.1 651,508 + H281DRAFT_00584 0.60 -0.4 651,578 + H281DRAFT_00584 0.74 -1.5 651,621 - H281DRAFT_00584 0.83 -0.3 652,854 - -0.9 653,119 + H281DRAFT_00586 0.20 +0.3 653,356 - H281DRAFT_00586 0.42 -0.0 653,356 - H281DRAFT_00586 0.42 -1.1 653,405 + H281DRAFT_00586 0.46 +0.4 653,489 + H281DRAFT_00586 0.54 +0.1 653,489 + H281DRAFT_00586 0.54 -0.7 653,489 + H281DRAFT_00586 0.54 +0.7 653,489 + H281DRAFT_00586 0.54 +0.3 653,490 - H281DRAFT_00586 0.54 -0.6 653,639 + H281DRAFT_00586 0.67 +0.5 653,795 + H281DRAFT_00586 0.82 -0.1 653,796 - H281DRAFT_00586 0.82 -0.0 653,796 - H281DRAFT_00586 0.82 -0.8 653,884 + H281DRAFT_00586 0.90 +0.3
Or see this region's nucleotide sequence