Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00534 and H281DRAFT_00535 are separated by 32 nucleotides H281DRAFT_00535 and H281DRAFT_00536 overlap by 21 nucleotides
H281DRAFT_00534: H281DRAFT_00534 - 50S ribosomal protein L16 3-hydroxylase, at 600,607 to 601,857
_00534
H281DRAFT_00535: H281DRAFT_00535 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD, at 601,890 to 602,435
_00535
H281DRAFT_00536: H281DRAFT_00536 - hypothetical protein, at 602,415 to 603,830
_00536
Position (kb) 601
602
603 Strain fitness (log2 ratio) -1
0
1 at 600.924 kb on - strand, within H281DRAFT_00534 at 600.924 kb on - strand, within H281DRAFT_00534 at 600.924 kb on - strand, within H281DRAFT_00534 at 600.924 kb on - strand, within H281DRAFT_00534 at 600.927 kb on + strand, within H281DRAFT_00534 at 600.928 kb on - strand, within H281DRAFT_00534 at 600.928 kb on - strand, within H281DRAFT_00534 at 600.928 kb on - strand, within H281DRAFT_00534 at 601.101 kb on - strand, within H281DRAFT_00534 at 601.208 kb on + strand, within H281DRAFT_00534 at 601.208 kb on + strand, within H281DRAFT_00534 at 601.208 kb on + strand, within H281DRAFT_00534 at 601.209 kb on - strand, within H281DRAFT_00534 at 601.209 kb on - strand, within H281DRAFT_00534 at 601.209 kb on - strand, within H281DRAFT_00534 at 601.359 kb on - strand, within H281DRAFT_00534 at 601.572 kb on + strand, within H281DRAFT_00534 at 601.573 kb on - strand, within H281DRAFT_00534 at 601.704 kb on - strand, within H281DRAFT_00534 at 601.860 kb on + strand at 601.860 kb on + strand at 601.860 kb on + strand at 601.861 kb on - strand at 601.863 kb on - strand at 601.863 kb on - strand at 601.926 kb on + strand at 601.927 kb on - strand at 601.984 kb on - strand, within H281DRAFT_00535 at 601.998 kb on + strand, within H281DRAFT_00535 at 602.215 kb on - strand, within H281DRAFT_00535 at 602.805 kb on + strand at 602.806 kb on - strand, within H281DRAFT_00536 at 602.890 kb on - strand, within H281DRAFT_00536 at 602.963 kb on - strand, within H281DRAFT_00536
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 600,924 - H281DRAFT_00534 0.25 +1.5 600,924 - H281DRAFT_00534 0.25 +0.1 600,924 - H281DRAFT_00534 0.25 +0.6 600,924 - H281DRAFT_00534 0.25 +0.2 600,927 + H281DRAFT_00534 0.26 +0.5 600,928 - H281DRAFT_00534 0.26 -0.1 600,928 - H281DRAFT_00534 0.26 +0.2 600,928 - H281DRAFT_00534 0.26 +0.4 601,101 - H281DRAFT_00534 0.39 -0.1 601,208 + H281DRAFT_00534 0.48 +0.4 601,208 + H281DRAFT_00534 0.48 -0.9 601,208 + H281DRAFT_00534 0.48 +0.7 601,209 - H281DRAFT_00534 0.48 -0.6 601,209 - H281DRAFT_00534 0.48 +0.7 601,209 - H281DRAFT_00534 0.48 -0.4 601,359 - H281DRAFT_00534 0.60 -0.5 601,572 + H281DRAFT_00534 0.77 +0.1 601,573 - H281DRAFT_00534 0.77 -0.2 601,704 - H281DRAFT_00534 0.88 +0.5 601,860 + -0.2 601,860 + +0.7 601,860 + -1.3 601,861 - -0.3 601,863 - -0.3 601,863 - -1.3 601,926 + -0.4 601,927 - +0.4 601,984 - H281DRAFT_00535 0.17 -1.3 601,998 + H281DRAFT_00535 0.20 -1.1 602,215 - H281DRAFT_00535 0.60 +0.1 602,805 + +0.3 602,806 - H281DRAFT_00536 0.28 +0.6 602,890 - H281DRAFT_00536 0.34 -0.2 602,963 - H281DRAFT_00536 0.39 +0.1
Or see this region's nucleotide sequence