Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06568 and H281DRAFT_06569 are separated by 961 nucleotides H281DRAFT_06569 and H281DRAFT_06570 are separated by 739 nucleotides
H281DRAFT_06568: H281DRAFT_06568 - DNA-binding protein H-NS, at 8,696 to 8,980
_06568
H281DRAFT_06569: H281DRAFT_06569 - hypothetical protein, at 9,942 to 10,133
_06569
H281DRAFT_06570: H281DRAFT_06570 - hypothetical protein, at 10,873 to 11,676
_06570
Position (kb)
9
10
11 Strain fitness (log2 ratio)
-2
-1
0
1 at 8.960 kb on + strand at 8.960 kb on + strand at 8.961 kb on - strand at 8.961 kb on - strand at 8.971 kb on - strand at 9.016 kb on + strand at 9.016 kb on + strand at 9.016 kb on + strand at 9.017 kb on - strand at 9.095 kb on + strand at 9.095 kb on + strand at 9.195 kb on - strand at 9.220 kb on + strand at 9.288 kb on + strand at 9.288 kb on + strand at 9.288 kb on + strand at 9.288 kb on + strand at 9.288 kb on + strand at 9.289 kb on - strand at 9.412 kb on + strand at 9.413 kb on - strand at 9.426 kb on - strand at 9.511 kb on + strand at 9.512 kb on - strand at 9.565 kb on + strand at 9.680 kb on + strand at 9.680 kb on + strand at 9.680 kb on + strand at 9.681 kb on - strand at 9.681 kb on - strand at 9.681 kb on - strand at 9.685 kb on + strand at 9.713 kb on + strand at 9.714 kb on - strand at 9.714 kb on - strand at 9.714 kb on - strand at 9.834 kb on + strand at 9.857 kb on + strand at 10.009 kb on + strand, within H281DRAFT_06569 at 10.009 kb on + strand, within H281DRAFT_06569 at 10.010 kb on - strand, within H281DRAFT_06569 at 10.044 kb on + strand, within H281DRAFT_06569 at 10.045 kb on - strand, within H281DRAFT_06569 at 10.101 kb on + strand, within H281DRAFT_06569 at 10.101 kb on + strand, within H281DRAFT_06569 at 10.101 kb on + strand, within H281DRAFT_06569 at 10.207 kb on + strand at 10.208 kb on - strand at 10.245 kb on + strand at 10.283 kb on + strand at 10.284 kb on - strand at 10.289 kb on - strand at 10.394 kb on + strand at 10.540 kb on - strand at 10.540 kb on - strand at 10.571 kb on + strand at 10.650 kb on + strand at 10.650 kb on + strand at 10.651 kb on - strand at 10.651 kb on - strand at 10.651 kb on - strand at 10.910 kb on + strand at 10.910 kb on + strand at 10.974 kb on + strand, within H281DRAFT_06570 at 10.978 kb on + strand, within H281DRAFT_06570 at 10.978 kb on + strand, within H281DRAFT_06570 at 10.978 kb on + strand, within H281DRAFT_06570 at 10.978 kb on + strand, within H281DRAFT_06570 at 10.979 kb on - strand, within H281DRAFT_06570 at 11.002 kb on + strand, within H281DRAFT_06570 at 11.004 kb on + strand, within H281DRAFT_06570 at 11.131 kb on + strand, within H281DRAFT_06570
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 8,960 + +0.4 8,960 + -0.5 8,961 - +0.7 8,961 - -0.5 8,971 - +0.5 9,016 + -0.0 9,016 + +0.2 9,016 + -0.0 9,017 - +0.1 9,095 + +0.1 9,095 + -1.0 9,195 - +0.4 9,220 + -0.5 9,288 + -0.4 9,288 + -0.4 9,288 + -1.0 9,288 + -0.9 9,288 + +0.6 9,289 - -0.0 9,412 + +0.3 9,413 - -0.8 9,426 - -0.6 9,511 + +0.1 9,512 - +0.3 9,565 + +0.3 9,680 + +0.1 9,680 + -0.7 9,680 + +0.4 9,681 - -0.2 9,681 - -0.8 9,681 - +1.1 9,685 + -0.8 9,713 + +0.7 9,714 - +0.3 9,714 - -0.0 9,714 - +0.5 9,834 + +1.4 9,857 + +0.6 10,009 + H281DRAFT_06569 0.35 +0.4 10,009 + H281DRAFT_06569 0.35 -0.0 10,010 - H281DRAFT_06569 0.35 +0.1 10,044 + H281DRAFT_06569 0.53 -0.1 10,045 - H281DRAFT_06569 0.54 -0.7 10,101 + H281DRAFT_06569 0.83 -0.3 10,101 + H281DRAFT_06569 0.83 -0.7 10,101 + H281DRAFT_06569 0.83 -0.1 10,207 + +0.6 10,208 - +0.5 10,245 + +0.2 10,283 + -0.8 10,284 - -1.0 10,289 - +1.2 10,394 + -0.7 10,540 - +0.5 10,540 - +0.2 10,571 + +0.1 10,650 + +0.4 10,650 + -0.1 10,651 - +0.2 10,651 - -0.2 10,651 - +0.7 10,910 + -0.4 10,910 + -0.6 10,974 + H281DRAFT_06570 0.13 +0.1 10,978 + H281DRAFT_06570 0.13 -0.9 10,978 + H281DRAFT_06570 0.13 -2.7 10,978 + H281DRAFT_06570 0.13 +0.1 10,978 + H281DRAFT_06570 0.13 +0.5 10,979 - H281DRAFT_06570 0.13 -0.4 11,002 + H281DRAFT_06570 0.16 +0.5 11,004 + H281DRAFT_06570 0.16 +0.0 11,131 + H281DRAFT_06570 0.32 -0.2
Or see this region's nucleotide sequence