Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06333 and H281DRAFT_06334 overlap by 1 nucleotides H281DRAFT_06334 and H281DRAFT_06335 overlap by 4 nucleotides H281DRAFT_06335 and H281DRAFT_06336 are separated by 143 nucleotides
H281DRAFT_06333: H281DRAFT_06333 - peptide/nickel transport system ATP-binding protein, at 6,269 to 8,113
_06333
H281DRAFT_06334: H281DRAFT_06334 - peptide/nickel transport system permease protein, at 8,113 to 9,060
_06334
H281DRAFT_06335: H281DRAFT_06335 - peptide/nickel transport system permease protein, at 9,057 to 10,010
_06335
H281DRAFT_06336: H281DRAFT_06336 - peptide/nickel transport system substrate-binding protein, at 10,154 to 11,770
_06336
Position (kb)
9
10
11 Strain fitness (log2 ratio)
-2
-1
0
1 at 8.402 kb on + strand, within H281DRAFT_06334 at 8.441 kb on + strand, within H281DRAFT_06334 at 8.442 kb on - strand, within H281DRAFT_06334 at 8.502 kb on - strand, within H281DRAFT_06334 at 8.792 kb on + strand, within H281DRAFT_06334 at 8.793 kb on - strand, within H281DRAFT_06334 at 8.835 kb on - strand, within H281DRAFT_06334 at 8.835 kb on - strand, within H281DRAFT_06334 at 9.008 kb on + strand at 9.010 kb on + strand at 9.011 kb on - strand at 9.046 kb on - strand at 9.365 kb on - strand, within H281DRAFT_06335 at 9.499 kb on + strand, within H281DRAFT_06335 at 9.499 kb on + strand, within H281DRAFT_06335 at 10.156 kb on - strand at 10.241 kb on - strand at 10.242 kb on + strand at 10.665 kb on + strand, within H281DRAFT_06336 at 10.806 kb on + strand, within H281DRAFT_06336
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 8,402 + H281DRAFT_06334 0.30 -0.6 8,441 + H281DRAFT_06334 0.35 +0.9 8,442 - H281DRAFT_06334 0.35 -0.1 8,502 - H281DRAFT_06334 0.41 -0.2 8,792 + H281DRAFT_06334 0.72 +0.4 8,793 - H281DRAFT_06334 0.72 -0.1 8,835 - H281DRAFT_06334 0.76 -0.6 8,835 - H281DRAFT_06334 0.76 -0.3 9,008 + -0.0 9,010 + +0.0 9,011 - +1.3 9,046 - -0.7 9,365 - H281DRAFT_06335 0.32 -0.3 9,499 + H281DRAFT_06335 0.46 -0.7 9,499 + H281DRAFT_06335 0.46 -0.6 10,156 - -0.5 10,241 - -0.0 10,242 + -2.1 10,665 + H281DRAFT_06336 0.32 -0.1 10,806 + H281DRAFT_06336 0.40 -2.1
Or see this region's nucleotide sequence