Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_06236

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_06235 and H281DRAFT_06236 are separated by 23 nucleotidesH281DRAFT_06236 and H281DRAFT_06237 overlap by 4 nucleotides H281DRAFT_06235: H281DRAFT_06235 - Phospho-N-acetylmuramoyl-pentapeptide-transferase, at 15,094 to 16,263 _06235 H281DRAFT_06236: H281DRAFT_06236 - UDP-N-acetylmuramoylalanine--D-glutamate ligase, at 16,287 to 17,801 _06236 H281DRAFT_06237: H281DRAFT_06237 - cell division-specific peptidoglycan biosynthesis regulator FtsW, at 17,798 to 19,066 _06237 Position (kb) 16 17 18Strain fitness (log2 ratio) -1 0 1at 16.269 kb on + strandat 16.269 kb on + strandat 16.272 kb on + strandat 16.272 kb on + strandat 17.764 kb on + strandat 17.797 kb on + strandat 17.797 kb on + strandat 17.797 kb on + strandat 17.942 kb on + strand, within H281DRAFT_06237

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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16,269 + -0.6
16,269 + +0.5
16,272 + -0.5
16,272 + +0.5
17,764 + +0.7
17,797 + +0.2
17,797 + -0.4
17,797 + -0.3
17,942 + H281DRAFT_06237 0.11 -0.2

Or see this region's nucleotide sequence