Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06165 and H281DRAFT_06166 are separated by 12 nucleotides H281DRAFT_06166 and H281DRAFT_06167 are separated by 16 nucleotides H281DRAFT_06167 and H281DRAFT_06168 are separated by 97 nucleotides
H281DRAFT_06165: H281DRAFT_06165 - hypothetical protein, at 57,712 to 58,581
_06165
H281DRAFT_06166: H281DRAFT_06166 - Superfamily I DNA or RNA helicase, at 58,594 to 60,285
_06166
H281DRAFT_06167: H281DRAFT_06167 - hypothetical protein, at 60,302 to 61,030
_06167
H281DRAFT_06168: H281DRAFT_06168 - hypothetical protein, at 61,128 to 61,640
_06168
Position (kb) 58
59
60
61 Strain fitness (log2 ratio) -1
0
1 at 57.663 kb on + strand at 57.664 kb on - strand at 57.664 kb on - strand at 57.664 kb on - strand at 57.695 kb on + strand at 57.695 kb on + strand at 57.696 kb on - strand at 57.711 kb on + strand at 57.712 kb on - strand at 58.096 kb on - strand, within H281DRAFT_06165 at 58.376 kb on - strand, within H281DRAFT_06165 at 58.690 kb on - strand at 58.862 kb on + strand, within H281DRAFT_06166 at 58.875 kb on + strand, within H281DRAFT_06166 at 59.027 kb on - strand, within H281DRAFT_06166 at 59.027 kb on - strand, within H281DRAFT_06166 at 59.035 kb on + strand, within H281DRAFT_06166 at 59.182 kb on + strand, within H281DRAFT_06166 at 59.254 kb on + strand, within H281DRAFT_06166 at 59.254 kb on + strand, within H281DRAFT_06166 at 59.254 kb on + strand, within H281DRAFT_06166 at 59.342 kb on - strand, within H281DRAFT_06166 at 59.606 kb on - strand, within H281DRAFT_06166 at 59.608 kb on + strand, within H281DRAFT_06166 at 59.608 kb on + strand, within H281DRAFT_06166 at 59.609 kb on - strand, within H281DRAFT_06166 at 59.896 kb on + strand, within H281DRAFT_06166 at 59.919 kb on - strand, within H281DRAFT_06166 at 59.980 kb on + strand, within H281DRAFT_06166 at 59.980 kb on + strand, within H281DRAFT_06166 at 59.981 kb on - strand, within H281DRAFT_06166 at 59.981 kb on - strand, within H281DRAFT_06166 at 60.028 kb on + strand, within H281DRAFT_06166 at 60.124 kb on - strand at 60.190 kb on + strand at 60.300 kb on + strand at 60.388 kb on - strand, within H281DRAFT_06167 at 60.431 kb on + strand, within H281DRAFT_06167 at 60.462 kb on - strand, within H281DRAFT_06167 at 60.462 kb on - strand, within H281DRAFT_06167 at 60.659 kb on + strand, within H281DRAFT_06167 at 60.823 kb on + strand, within H281DRAFT_06167 at 60.836 kb on + strand, within H281DRAFT_06167 at 60.837 kb on - strand, within H281DRAFT_06167 at 60.891 kb on - strand, within H281DRAFT_06167 at 61.029 kb on - strand at 61.138 kb on - strand at 61.152 kb on - strand at 61.152 kb on - strand at 61.152 kb on - strand at 61.152 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 57,663 + +0.9 57,664 - +0.6 57,664 - +0.4 57,664 - -1.6 57,695 + +0.3 57,695 + +0.7 57,696 - -0.5 57,711 + +0.1 57,712 - -0.5 58,096 - H281DRAFT_06165 0.44 +0.1 58,376 - H281DRAFT_06165 0.76 +1.2 58,690 - -1.0 58,862 + H281DRAFT_06166 0.16 +0.1 58,875 + H281DRAFT_06166 0.17 -0.4 59,027 - H281DRAFT_06166 0.26 +0.5 59,027 - H281DRAFT_06166 0.26 +0.3 59,035 + H281DRAFT_06166 0.26 -0.6 59,182 + H281DRAFT_06166 0.35 +1.0 59,254 + H281DRAFT_06166 0.39 +0.4 59,254 + H281DRAFT_06166 0.39 -0.5 59,254 + H281DRAFT_06166 0.39 -0.6 59,342 - H281DRAFT_06166 0.44 +0.2 59,606 - H281DRAFT_06166 0.60 +0.1 59,608 + H281DRAFT_06166 0.60 -0.2 59,608 + H281DRAFT_06166 0.60 +0.1 59,609 - H281DRAFT_06166 0.60 +0.4 59,896 + H281DRAFT_06166 0.77 +0.0 59,919 - H281DRAFT_06166 0.78 +0.7 59,980 + H281DRAFT_06166 0.82 -0.4 59,980 + H281DRAFT_06166 0.82 +0.0 59,981 - H281DRAFT_06166 0.82 +0.9 59,981 - H281DRAFT_06166 0.82 -0.6 60,028 + H281DRAFT_06166 0.85 +0.4 60,124 - -0.6 60,190 + +0.8 60,300 + +0.0 60,388 - H281DRAFT_06167 0.12 -0.2 60,431 + H281DRAFT_06167 0.18 +0.2 60,462 - H281DRAFT_06167 0.22 -0.4 60,462 - H281DRAFT_06167 0.22 -1.1 60,659 + H281DRAFT_06167 0.49 -0.1 60,823 + H281DRAFT_06167 0.71 +0.4 60,836 + H281DRAFT_06167 0.73 -0.1 60,837 - H281DRAFT_06167 0.73 +0.2 60,891 - H281DRAFT_06167 0.81 -0.1 61,029 - -0.3 61,138 - -0.5 61,152 - -0.6 61,152 - +0.9 61,152 - -0.3 61,152 - +0.3
Or see this region's nucleotide sequence