Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06138 and H281DRAFT_06139 are separated by 207 nucleotides H281DRAFT_06139 and H281DRAFT_06140 are separated by 265 nucleotides
H281DRAFT_06138: H281DRAFT_06138 - DNA-binding transcriptional regulator, LysR family, at 29,413 to 30,309
_06138
H281DRAFT_06139: H281DRAFT_06139 - Predicted metal-dependent hydrolase, TIM-barrel fold, at 30,517 to 31,473
_06139
H281DRAFT_06140: H281DRAFT_06140 - LysR substrate binding domain-containing protein, at 31,739 to 31,948
_06140
Position (kb)
30
31
32 Strain fitness (log2 ratio)
-1
0
1 at 29.563 kb on - strand, within H281DRAFT_06138 at 29.738 kb on + strand, within H281DRAFT_06138 at 29.931 kb on + strand, within H281DRAFT_06138 at 29.973 kb on - strand, within H281DRAFT_06138 at 29.973 kb on - strand, within H281DRAFT_06138 at 30.034 kb on + strand, within H281DRAFT_06138 at 30.035 kb on - strand, within H281DRAFT_06138 at 30.035 kb on - strand, within H281DRAFT_06138 at 30.035 kb on - strand, within H281DRAFT_06138 at 30.296 kb on + strand at 30.336 kb on + strand at 30.337 kb on - strand at 30.377 kb on - strand at 30.401 kb on - strand at 30.456 kb on + strand at 30.457 kb on - strand at 30.457 kb on - strand at 30.457 kb on - strand at 30.457 kb on - strand at 30.502 kb on + strand at 30.502 kb on + strand at 30.509 kb on + strand at 30.510 kb on - strand at 30.510 kb on - strand at 30.696 kb on + strand, within H281DRAFT_06139 at 30.697 kb on - strand, within H281DRAFT_06139 at 30.700 kb on + strand, within H281DRAFT_06139 at 30.700 kb on + strand, within H281DRAFT_06139 at 30.701 kb on - strand, within H281DRAFT_06139 at 30.822 kb on + strand, within H281DRAFT_06139 at 30.822 kb on + strand, within H281DRAFT_06139 at 30.822 kb on + strand, within H281DRAFT_06139 at 30.827 kb on - strand, within H281DRAFT_06139 at 30.827 kb on - strand, within H281DRAFT_06139 at 30.903 kb on + strand, within H281DRAFT_06139 at 31.046 kb on + strand, within H281DRAFT_06139 at 31.046 kb on + strand, within H281DRAFT_06139 at 31.046 kb on + strand, within H281DRAFT_06139 at 31.046 kb on + strand, within H281DRAFT_06139 at 31.046 kb on + strand, within H281DRAFT_06139 at 31.046 kb on + strand, within H281DRAFT_06139 at 31.047 kb on - strand, within H281DRAFT_06139 at 31.047 kb on - strand, within H281DRAFT_06139 at 31.047 kb on - strand, within H281DRAFT_06139 at 31.047 kb on - strand, within H281DRAFT_06139 at 31.070 kb on - strand, within H281DRAFT_06139 at 31.139 kb on + strand, within H281DRAFT_06139 at 31.139 kb on + strand, within H281DRAFT_06139 at 31.174 kb on - strand, within H281DRAFT_06139 at 31.210 kb on + strand, within H281DRAFT_06139 at 31.215 kb on - strand, within H281DRAFT_06139 at 31.215 kb on - strand, within H281DRAFT_06139 at 31.215 kb on - strand, within H281DRAFT_06139 at 31.215 kb on - strand at 31.215 kb on - strand, within H281DRAFT_06139 at 31.215 kb on - strand, within H281DRAFT_06139 at 31.215 kb on - strand, within H281DRAFT_06139 at 31.232 kb on - strand, within H281DRAFT_06139 at 31.232 kb on - strand, within H281DRAFT_06139 at 31.262 kb on - strand, within H281DRAFT_06139 at 31.277 kb on + strand, within H281DRAFT_06139 at 31.277 kb on + strand, within H281DRAFT_06139 at 31.277 kb on + strand, within H281DRAFT_06139 at 31.278 kb on - strand, within H281DRAFT_06139 at 31.278 kb on - strand, within H281DRAFT_06139 at 31.278 kb on - strand, within H281DRAFT_06139 at 31.278 kb on - strand, within H281DRAFT_06139 at 31.291 kb on + strand, within H281DRAFT_06139 at 31.292 kb on - strand, within H281DRAFT_06139 at 31.399 kb on - strand at 31.399 kb on - strand at 31.493 kb on - strand at 31.511 kb on + strand at 31.512 kb on - strand at 31.689 kb on + strand at 31.695 kb on + strand at 31.846 kb on + strand, within H281DRAFT_06140 at 31.846 kb on + strand, within H281DRAFT_06140 at 31.847 kb on - strand, within H281DRAFT_06140 at 31.847 kb on - strand, within H281DRAFT_06140 at 31.853 kb on + strand, within H281DRAFT_06140 at 31.853 kb on + strand, within H281DRAFT_06140 at 31.889 kb on + strand, within H281DRAFT_06140 at 31.890 kb on - strand, within H281DRAFT_06140 at 31.890 kb on - strand, within H281DRAFT_06140 at 31.890 kb on - strand, within H281DRAFT_06140 at 31.924 kb on - strand, within H281DRAFT_06140 at 31.975 kb on - strand at 32.012 kb on + strand at 32.041 kb on + strand at 32.083 kb on + strand at 32.083 kb on + strand at 32.131 kb on + strand at 32.200 kb on - strand at 32.254 kb on - strand at 32.254 kb on - strand at 32.257 kb on - strand at 32.325 kb on - strand at 32.333 kb on + strand at 32.372 kb on + strand at 32.372 kb on + strand at 32.372 kb on + strand at 32.372 kb on + strand at 32.372 kb on + strand at 32.372 kb on + strand at 32.372 kb on + strand at 32.372 kb on + strand at 32.372 kb on + strand at 32.372 kb on + strand at 32.373 kb on - strand at 32.373 kb on - strand at 32.373 kb on - strand at 32.373 kb on - strand at 32.421 kb on + strand at 32.458 kb on + strand at 32.459 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 29,563 - H281DRAFT_06138 0.17 +0.6 29,738 + H281DRAFT_06138 0.36 +0.2 29,931 + H281DRAFT_06138 0.58 -0.1 29,973 - H281DRAFT_06138 0.62 -0.5 29,973 - H281DRAFT_06138 0.62 +0.1 30,034 + H281DRAFT_06138 0.69 -0.2 30,035 - H281DRAFT_06138 0.69 -0.4 30,035 - H281DRAFT_06138 0.69 -0.4 30,035 - H281DRAFT_06138 0.69 -0.2 30,296 + -0.6 30,336 + +0.6 30,337 - -0.3 30,377 - -0.4 30,401 - +0.1 30,456 + -0.8 30,457 - +0.3 30,457 - -1.4 30,457 - -1.2 30,457 - +0.3 30,502 + -0.9 30,502 + -1.0 30,509 + +0.5 30,510 - +0.2 30,510 - -0.2 30,696 + H281DRAFT_06139 0.19 +0.1 30,697 - H281DRAFT_06139 0.19 -0.5 30,700 + H281DRAFT_06139 0.19 -0.3 30,700 + H281DRAFT_06139 0.19 -0.5 30,701 - H281DRAFT_06139 0.19 -0.5 30,822 + H281DRAFT_06139 0.32 +0.2 30,822 + H281DRAFT_06139 0.32 +0.2 30,822 + H281DRAFT_06139 0.32 -0.5 30,827 - H281DRAFT_06139 0.32 +0.5 30,827 - H281DRAFT_06139 0.32 -1.0 30,903 + H281DRAFT_06139 0.40 -0.2 31,046 + H281DRAFT_06139 0.55 +0.4 31,046 + H281DRAFT_06139 0.55 +0.0 31,046 + H281DRAFT_06139 0.55 -0.3 31,046 + H281DRAFT_06139 0.55 +0.4 31,046 + H281DRAFT_06139 0.55 +0.0 31,046 + H281DRAFT_06139 0.55 -0.9 31,047 - H281DRAFT_06139 0.55 -0.8 31,047 - H281DRAFT_06139 0.55 +0.3 31,047 - H281DRAFT_06139 0.55 +0.5 31,047 - H281DRAFT_06139 0.55 +0.3 31,070 - H281DRAFT_06139 0.58 -0.7 31,139 + H281DRAFT_06139 0.65 +0.7 31,139 + H281DRAFT_06139 0.65 +0.0 31,174 - H281DRAFT_06139 0.69 +0.2 31,210 + H281DRAFT_06139 0.72 -0.3 31,215 - H281DRAFT_06139 0.73 -0.3 31,215 - H281DRAFT_06139 0.73 +1.2 31,215 - H281DRAFT_06139 0.73 +0.3 31,215 - -0.8 31,215 - H281DRAFT_06139 0.73 +0.1 31,215 - H281DRAFT_06139 0.73 -0.5 31,215 - H281DRAFT_06139 0.73 +0.4 31,232 - H281DRAFT_06139 0.75 -0.4 31,232 - H281DRAFT_06139 0.75 +0.0 31,262 - H281DRAFT_06139 0.78 +0.2 31,277 + H281DRAFT_06139 0.79 +0.2 31,277 + H281DRAFT_06139 0.79 +0.9 31,277 + H281DRAFT_06139 0.79 +0.5 31,278 - H281DRAFT_06139 0.80 +0.0 31,278 - H281DRAFT_06139 0.80 +0.1 31,278 - H281DRAFT_06139 0.80 +0.0 31,278 - H281DRAFT_06139 0.80 +0.3 31,291 + H281DRAFT_06139 0.81 +1.0 31,292 - H281DRAFT_06139 0.81 -0.4 31,399 - +0.0 31,399 - -0.1 31,493 - -0.1 31,511 + -0.6 31,512 - +0.4 31,689 + +0.4 31,695 + -0.8 31,846 + H281DRAFT_06140 0.51 +0.0 31,846 + H281DRAFT_06140 0.51 +0.7 31,847 - H281DRAFT_06140 0.51 +0.2 31,847 - H281DRAFT_06140 0.51 -0.0 31,853 + H281DRAFT_06140 0.54 +0.3 31,853 + H281DRAFT_06140 0.54 +0.0 31,889 + H281DRAFT_06140 0.71 -0.3 31,890 - H281DRAFT_06140 0.72 -1.0 31,890 - H281DRAFT_06140 0.72 +0.3 31,890 - H281DRAFT_06140 0.72 -0.3 31,924 - H281DRAFT_06140 0.88 -0.5 31,975 - +0.1 32,012 + +0.1 32,041 + -0.0 32,083 + +0.1 32,083 + +0.7 32,131 + +0.1 32,200 - -0.1 32,254 - +1.0 32,254 - -0.6 32,257 - +0.1 32,325 - +0.0 32,333 + +0.1 32,372 + -0.4 32,372 + -0.3 32,372 + +0.3 32,372 + +0.7 32,372 + -0.2 32,372 + -1.0 32,372 + -0.7 32,372 + +0.5 32,372 + -0.3 32,372 + +0.6 32,373 - -0.3 32,373 - +0.1 32,373 - +0.1 32,373 - -0.2 32,421 + -0.2 32,458 + +0.3 32,459 - -0.1
Or see this region's nucleotide sequence