Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05596 and H281DRAFT_05597 are separated by 376 nucleotides H281DRAFT_05597 and H281DRAFT_05598 overlap by 8 nucleotides H281DRAFT_05598 and H281DRAFT_05599 are separated by 161 nucleotides
H281DRAFT_05596: H281DRAFT_05596 - LSU ribosomal protein L17P, at 14,783 to 15,175
_05596
H281DRAFT_05597: H281DRAFT_05597 - divalent cation tolerance protein, at 15,552 to 15,884
_05597
H281DRAFT_05598: H281DRAFT_05598 - thiol:disulfide interchange protein DsbD, at 15,877 to 17,736
_05598
H281DRAFT_05599: H281DRAFT_05599 - porphobilinogen synthase, at 17,898 to 18,896
_05599
Position (kb) 15
16
17
18 Strain fitness (log2 ratio) -2
-1
0
1 at 15.173 kb on + strand at 15.173 kb on + strand at 15.173 kb on + strand at 15.197 kb on - strand at 15.197 kb on - strand at 15.370 kb on + strand at 15.370 kb on + strand at 15.370 kb on + strand at 15.370 kb on + strand at 15.415 kb on - strand at 15.511 kb on + strand at 15.512 kb on - strand at 15.512 kb on - strand at 15.512 kb on - strand at 15.516 kb on + strand at 15.718 kb on + strand, within H281DRAFT_05597 at 15.718 kb on + strand, within H281DRAFT_05597 at 15.719 kb on - strand, within H281DRAFT_05597 at 15.719 kb on - strand, within H281DRAFT_05597 at 15.719 kb on - strand, within H281DRAFT_05597 at 15.768 kb on + strand, within H281DRAFT_05597 at 15.768 kb on + strand, within H281DRAFT_05597 at 15.768 kb on + strand, within H281DRAFT_05597 at 15.768 kb on + strand, within H281DRAFT_05597 at 15.768 kb on + strand, within H281DRAFT_05597 at 15.768 kb on + strand, within H281DRAFT_05597 at 15.769 kb on - strand, within H281DRAFT_05597 at 15.769 kb on - strand, within H281DRAFT_05597 at 15.769 kb on - strand, within H281DRAFT_05597 at 15.772 kb on + strand, within H281DRAFT_05597 at 15.772 kb on + strand, within H281DRAFT_05597 at 15.772 kb on + strand at 15.772 kb on + strand, within H281DRAFT_05597 at 15.773 kb on - strand at 15.773 kb on - strand, within H281DRAFT_05597 at 15.773 kb on - strand, within H281DRAFT_05597 at 15.773 kb on - strand, within H281DRAFT_05597 at 15.789 kb on + strand, within H281DRAFT_05597 at 15.789 kb on + strand, within H281DRAFT_05597 at 15.789 kb on + strand, within H281DRAFT_05597 at 15.789 kb on + strand, within H281DRAFT_05597 at 15.837 kb on + strand, within H281DRAFT_05597 at 15.837 kb on + strand, within H281DRAFT_05597 at 15.838 kb on - strand, within H281DRAFT_05597 at 17.873 kb on + strand at 17.874 kb on - strand at 17.874 kb on - strand at 17.874 kb on - strand at 17.874 kb on - strand at 17.874 kb on - strand at 17.900 kb on - strand at 17.900 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 15,173 + -1.3 15,173 + -0.4 15,173 + +0.5 15,197 - +0.2 15,197 - -1.1 15,370 + +0.1 15,370 + -0.2 15,370 + +0.5 15,370 + +1.1 15,415 - +0.6 15,511 + -0.4 15,512 - -0.3 15,512 - +0.5 15,512 - +0.1 15,516 + -0.3 15,718 + H281DRAFT_05597 0.50 -0.1 15,718 + H281DRAFT_05597 0.50 +1.2 15,719 - H281DRAFT_05597 0.50 +0.2 15,719 - H281DRAFT_05597 0.50 -0.0 15,719 - H281DRAFT_05597 0.50 -0.2 15,768 + H281DRAFT_05597 0.65 -0.4 15,768 + H281DRAFT_05597 0.65 -0.4 15,768 + H281DRAFT_05597 0.65 +0.3 15,768 + H281DRAFT_05597 0.65 +0.3 15,768 + H281DRAFT_05597 0.65 -0.7 15,768 + H281DRAFT_05597 0.65 +0.3 15,769 - H281DRAFT_05597 0.65 +0.6 15,769 - H281DRAFT_05597 0.65 -0.9 15,769 - H281DRAFT_05597 0.65 -0.5 15,772 + H281DRAFT_05597 0.66 -1.0 15,772 + H281DRAFT_05597 0.66 +0.5 15,772 + +1.1 15,772 + H281DRAFT_05597 0.66 -1.5 15,773 - +0.1 15,773 - H281DRAFT_05597 0.66 -0.3 15,773 - H281DRAFT_05597 0.66 -0.4 15,773 - H281DRAFT_05597 0.66 +1.1 15,789 + H281DRAFT_05597 0.71 -1.4 15,789 + H281DRAFT_05597 0.71 -0.1 15,789 + H281DRAFT_05597 0.71 +0.2 15,789 + H281DRAFT_05597 0.71 -0.0 15,837 + H281DRAFT_05597 0.86 -0.2 15,837 + H281DRAFT_05597 0.86 -0.7 15,838 - H281DRAFT_05597 0.86 +0.1 17,873 + -1.0 17,874 - -0.1 17,874 - -1.8 17,874 - +0.2 17,874 - -0.1 17,874 - -0.2 17,900 - -0.6 17,900 - +0.2
Or see this region's nucleotide sequence