Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05568

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_05566 and H281DRAFT_05567 are separated by 130 nucleotidesH281DRAFT_05567 and H281DRAFT_05568 are separated by 201 nucleotidesH281DRAFT_05568 and H281DRAFT_05569 overlap by 1 nucleotidesH281DRAFT_05569 and H281DRAFT_05570 overlap by 4 nucleotidesH281DRAFT_05570 and H281DRAFT_05571 are separated by 2 nucleotides H281DRAFT_05566: H281DRAFT_05566 - translation elongation factor TU, at 1 to 360 _05566 H281DRAFT_05567: H281DRAFT_05567 - SSU ribosomal protein S10P, at 491 to 802 _05567 H281DRAFT_05568: H281DRAFT_05568 - LSU ribosomal protein L3P, at 1,004 to 1,663 _05568 H281DRAFT_05569: H281DRAFT_05569 - LSU ribosomal protein L4P, at 1,663 to 2,283 _05569 H281DRAFT_05570: H281DRAFT_05570 - LSU ribosomal protein L23P, at 2,280 to 2,594 _05570 H281DRAFT_05571: H281DRAFT_05571 - LSU ribosomal protein L2P, at 2,597 to 3,424 _05571 Position (kb) 1 2Strain fitness (log2 ratio) -1 0 1at 0.358 kb on + strandat 0.838 kb on + strandat 0.838 kb on + strandat 0.838 kb on + strandat 0.839 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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358 + -1.7
838 + -0.3
838 + -0.4
838 + -0.9
839 - -1.1

Or see this region's nucleotide sequence