Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04780 and H281DRAFT_04781 are separated by 183 nucleotides H281DRAFT_04781 and H281DRAFT_04782 are separated by 169 nucleotides H281DRAFT_04782 and H281DRAFT_04783 are separated by 98 nucleotides
H281DRAFT_04780: H281DRAFT_04780 - hypothetical protein, at 202,201 to 202,695
_04780
H281DRAFT_04781: H281DRAFT_04781 - putative colanic acid biosynthesis acetyltransferase WcaF, at 202,879 to 203,493
_04781
H281DRAFT_04782: H281DRAFT_04782 - Choline dehydrogenase, at 203,663 to 205,396
_04782
H281DRAFT_04783: H281DRAFT_04783 - Glycosyltransferase involved in cell wall bisynthesis, at 205,495 to 206,712
_04783
Position (kb) 203
204
205
206 Strain fitness (log2 ratio) -1
0
1 at 202.675 kb on - strand at 202.710 kb on + strand at 202.711 kb on - strand at 202.845 kb on - strand at 203.010 kb on - strand, within H281DRAFT_04781 at 203.782 kb on + strand at 204.018 kb on - strand, within H281DRAFT_04782 at 204.020 kb on + strand, within H281DRAFT_04782 at 204.020 kb on + strand, within H281DRAFT_04782 at 204.021 kb on - strand, within H281DRAFT_04782 at 204.021 kb on - strand, within H281DRAFT_04782 at 204.186 kb on - strand, within H281DRAFT_04782 at 204.208 kb on + strand, within H281DRAFT_04782 at 204.438 kb on - strand, within H281DRAFT_04782 at 204.438 kb on - strand, within H281DRAFT_04782 at 204.510 kb on - strand, within H281DRAFT_04782 at 205.144 kb on - strand, within H281DRAFT_04782 at 205.217 kb on - strand, within H281DRAFT_04782 at 205.313 kb on - strand at 205.322 kb on - strand at 205.469 kb on + strand at 205.469 kb on + strand at 205.471 kb on + strand at 206.009 kb on - strand, within H281DRAFT_04783
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 202,675 - -0.7 202,710 + +0.1 202,711 - -0.5 202,845 - -0.3 203,010 - H281DRAFT_04781 0.21 -1.1 203,782 + -0.3 204,018 - H281DRAFT_04782 0.20 +0.2 204,020 + H281DRAFT_04782 0.21 +0.1 204,020 + H281DRAFT_04782 0.21 +0.5 204,021 - H281DRAFT_04782 0.21 -0.3 204,021 - H281DRAFT_04782 0.21 -0.4 204,186 - H281DRAFT_04782 0.30 +1.2 204,208 + H281DRAFT_04782 0.31 +0.0 204,438 - H281DRAFT_04782 0.45 +0.3 204,438 - H281DRAFT_04782 0.45 +0.2 204,510 - H281DRAFT_04782 0.49 -0.2 205,144 - H281DRAFT_04782 0.85 -0.1 205,217 - H281DRAFT_04782 0.90 +0.1 205,313 - -0.3 205,322 - +0.7 205,469 + -0.6 205,469 + +0.3 205,471 + -0.3 206,009 - H281DRAFT_04783 0.42 -0.0
Or see this region's nucleotide sequence