Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04761 and H281DRAFT_04762 are separated by 268 nucleotides H281DRAFT_04762 and H281DRAFT_04763 are separated by 296 nucleotides
H281DRAFT_04761: H281DRAFT_04761 - Threonine/homoserine/homoserine lactone efflux protein, at 176,358 to 176,999
_04761
H281DRAFT_04762: H281DRAFT_04762 - transcriptional regulator, LysR family, at 177,268 to 178,161
_04762
H281DRAFT_04763: H281DRAFT_04763 - hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4), at 178,458 to 179,441
_04763
Position (kb) 177
178
179 Strain fitness (log2 ratio) -1
0
1 at 176.528 kb on + strand, within H281DRAFT_04761 at 176.528 kb on + strand, within H281DRAFT_04761 at 176.743 kb on + strand, within H281DRAFT_04761 at 176.839 kb on + strand, within H281DRAFT_04761 at 176.839 kb on + strand, within H281DRAFT_04761 at 176.839 kb on + strand, within H281DRAFT_04761 at 176.840 kb on - strand, within H281DRAFT_04761 at 176.840 kb on - strand, within H281DRAFT_04761 at 176.925 kb on - strand, within H281DRAFT_04761 at 177.004 kb on - strand at 177.004 kb on - strand at 177.111 kb on - strand at 177.233 kb on + strand at 177.234 kb on - strand at 177.529 kb on + strand, within H281DRAFT_04762 at 177.529 kb on - strand, within H281DRAFT_04762 at 177.635 kb on + strand, within H281DRAFT_04762 at 177.635 kb on + strand, within H281DRAFT_04762 at 177.925 kb on + strand, within H281DRAFT_04762 at 177.926 kb on - strand, within H281DRAFT_04762 at 177.926 kb on - strand, within H281DRAFT_04762 at 177.935 kb on - strand, within H281DRAFT_04762 at 178.176 kb on + strand at 178.177 kb on - strand at 178.467 kb on - strand at 178.573 kb on - strand, within H281DRAFT_04763
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 176,528 + H281DRAFT_04761 0.26 -0.2 176,528 + H281DRAFT_04761 0.26 +0.5 176,743 + H281DRAFT_04761 0.60 -0.3 176,839 + H281DRAFT_04761 0.75 -0.2 176,839 + H281DRAFT_04761 0.75 +0.4 176,839 + H281DRAFT_04761 0.75 +0.2 176,840 - H281DRAFT_04761 0.75 +0.0 176,840 - H281DRAFT_04761 0.75 -0.1 176,925 - H281DRAFT_04761 0.88 -0.1 177,004 - -0.3 177,004 - +1.1 177,111 - +0.8 177,233 + -0.0 177,234 - +0.6 177,529 + H281DRAFT_04762 0.29 +0.6 177,529 - H281DRAFT_04762 0.29 -0.1 177,635 + H281DRAFT_04762 0.41 +0.5 177,635 + H281DRAFT_04762 0.41 +0.6 177,925 + H281DRAFT_04762 0.73 +0.9 177,926 - H281DRAFT_04762 0.74 +0.6 177,926 - H281DRAFT_04762 0.74 -0.4 177,935 - H281DRAFT_04762 0.75 +0.8 178,176 + +0.1 178,177 - -0.7 178,467 - -0.7 178,573 - H281DRAFT_04763 0.12 +0.5
Or see this region's nucleotide sequence