Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04653 and H281DRAFT_04654 are separated by 26 nucleotides H281DRAFT_04654 and H281DRAFT_04655 overlap by 1 nucleotides
H281DRAFT_04653: H281DRAFT_04653 - NAD(P) transhydrogenase subunit alpha, at 54,840 to 55,982
_04653
H281DRAFT_04654: H281DRAFT_04654 - NAD(P) transhydrogenase subunit alpha, at 56,009 to 56,338
_04654
H281DRAFT_04655: H281DRAFT_04655 - NAD(P) transhydrogenase subunit beta, at 56,338 to 57,792
_04655
Position (kb) 56
57 Strain fitness (log2 ratio) -1
0
1 at 55.145 kb on - strand, within H281DRAFT_04653 at 55.252 kb on - strand, within H281DRAFT_04653 at 55.281 kb on + strand, within H281DRAFT_04653 at 55.483 kb on - strand, within H281DRAFT_04653 at 55.725 kb on + strand, within H281DRAFT_04653 at 55.726 kb on - strand, within H281DRAFT_04653 at 55.726 kb on - strand, within H281DRAFT_04653 at 55.851 kb on + strand, within H281DRAFT_04653 at 55.980 kb on + strand at 55.981 kb on - strand at 56.063 kb on + strand, within H281DRAFT_04654 at 56.064 kb on - strand, within H281DRAFT_04654 at 56.336 kb on + strand at 56.365 kb on + strand at 56.365 kb on + strand at 56.365 kb on + strand at 56.365 kb on + strand at 56.365 kb on + strand at 56.366 kb on - strand at 56.439 kb on + strand at 56.440 kb on - strand at 56.440 kb on - strand at 56.775 kb on + strand, within H281DRAFT_04655 at 56.776 kb on - strand, within H281DRAFT_04655 at 56.839 kb on + strand, within H281DRAFT_04655 at 56.875 kb on + strand, within H281DRAFT_04655 at 56.875 kb on + strand, within H281DRAFT_04655 at 57.064 kb on + strand, within H281DRAFT_04655 at 57.163 kb on + strand, within H281DRAFT_04655 at 57.163 kb on + strand, within H281DRAFT_04655 at 57.164 kb on - strand, within H281DRAFT_04655
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 55,145 - H281DRAFT_04653 0.27 -0.9 55,252 - H281DRAFT_04653 0.36 +0.6 55,281 + H281DRAFT_04653 0.39 -0.6 55,483 - H281DRAFT_04653 0.56 +0.6 55,725 + H281DRAFT_04653 0.77 +0.5 55,726 - H281DRAFT_04653 0.78 +0.3 55,726 - H281DRAFT_04653 0.78 -0.5 55,851 + H281DRAFT_04653 0.88 -0.0 55,980 + -0.0 55,981 - -0.1 56,063 + H281DRAFT_04654 0.16 -0.8 56,064 - H281DRAFT_04654 0.17 -1.0 56,336 + -0.2 56,365 + -0.5 56,365 + -0.0 56,365 + -0.7 56,365 + -0.1 56,365 + -0.0 56,366 - -0.3 56,439 + -0.5 56,440 - +0.8 56,440 - +0.1 56,775 + H281DRAFT_04655 0.30 +0.6 56,776 - H281DRAFT_04655 0.30 +0.5 56,839 + H281DRAFT_04655 0.34 +0.0 56,875 + H281DRAFT_04655 0.37 +0.7 56,875 + H281DRAFT_04655 0.37 -0.4 57,064 + H281DRAFT_04655 0.50 -0.8 57,163 + H281DRAFT_04655 0.57 -0.7 57,163 + H281DRAFT_04655 0.57 -1.1 57,164 - H281DRAFT_04655 0.57 +0.2
Or see this region's nucleotide sequence