Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04467 and H281DRAFT_04468 are separated by 70 nucleotides H281DRAFT_04468 and H281DRAFT_04469 are separated by 187 nucleotides
H281DRAFT_04467: H281DRAFT_04467 - UDP-glucose pyrophosphorylase, at 190,907 to 191,788
_04467
H281DRAFT_04468: H281DRAFT_04468 - valyl-tRNA synthetase, at 191,859 to 194,738
_04468
H281DRAFT_04469: H281DRAFT_04469 - ATP-dependent DNA helicase UvrD, at 194,926 to 197,289
_04469
Position (kb)
191
192
193
194
195 Strain fitness (log2 ratio)
-1
0
1 at 190.909 kb on - strand at 190.941 kb on + strand at 190.941 kb on + strand at 191.005 kb on - strand, within H281DRAFT_04467 at 191.005 kb on - strand, within H281DRAFT_04467 at 191.005 kb on - strand, within H281DRAFT_04467 at 191.043 kb on + strand, within H281DRAFT_04467 at 191.043 kb on + strand, within H281DRAFT_04467 at 191.044 kb on - strand, within H281DRAFT_04467 at 191.050 kb on - strand, within H281DRAFT_04467 at 191.050 kb on - strand, within H281DRAFT_04467 at 191.166 kb on + strand, within H281DRAFT_04467 at 191.166 kb on + strand, within H281DRAFT_04467 at 191.166 kb on + strand, within H281DRAFT_04467 at 191.166 kb on + strand, within H281DRAFT_04467 at 191.167 kb on - strand, within H281DRAFT_04467 at 191.167 kb on - strand, within H281DRAFT_04467 at 191.273 kb on - strand, within H281DRAFT_04467 at 191.332 kb on - strand, within H281DRAFT_04467 at 191.380 kb on - strand, within H281DRAFT_04467 at 191.484 kb on + strand, within H281DRAFT_04467 at 191.485 kb on - strand, within H281DRAFT_04467 at 191.582 kb on - strand, within H281DRAFT_04467 at 191.765 kb on + strand at 191.784 kb on - strand at 191.813 kb on + strand at 191.813 kb on + strand at 191.814 kb on - strand at 191.814 kb on - strand at 191.814 kb on - strand at 191.817 kb on + strand at 191.817 kb on + strand at 191.817 kb on + strand at 191.818 kb on - strand at 194.777 kb on + strand at 194.891 kb on + strand at 194.892 kb on - strand at 194.892 kb on - strand at 194.892 kb on - strand at 194.892 kb on - strand at 194.893 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 190,909 - +0.0 190,941 + -0.5 190,941 + +1.2 191,005 - H281DRAFT_04467 0.11 +0.8 191,005 - H281DRAFT_04467 0.11 -0.2 191,005 - H281DRAFT_04467 0.11 +0.3 191,043 + H281DRAFT_04467 0.15 +0.0 191,043 + H281DRAFT_04467 0.15 +0.1 191,044 - H281DRAFT_04467 0.16 +0.1 191,050 - H281DRAFT_04467 0.16 -0.2 191,050 - H281DRAFT_04467 0.16 +1.0 191,166 + H281DRAFT_04467 0.29 -0.5 191,166 + H281DRAFT_04467 0.29 -0.1 191,166 + H281DRAFT_04467 0.29 -0.3 191,166 + H281DRAFT_04467 0.29 +0.3 191,167 - H281DRAFT_04467 0.29 -0.6 191,167 - H281DRAFT_04467 0.29 +0.5 191,273 - H281DRAFT_04467 0.41 -0.3 191,332 - H281DRAFT_04467 0.48 -0.2 191,380 - H281DRAFT_04467 0.54 +0.6 191,484 + H281DRAFT_04467 0.65 -0.5 191,485 - H281DRAFT_04467 0.66 -0.5 191,582 - H281DRAFT_04467 0.77 +0.1 191,765 + -0.0 191,784 - +0.3 191,813 + -0.5 191,813 + +0.7 191,814 - +0.7 191,814 - +0.2 191,814 - -0.1 191,817 + -0.3 191,817 + -0.2 191,817 + +0.3 191,818 - -0.2 194,777 + +0.6 194,891 + +1.0 194,892 - +0.3 194,892 - +0.3 194,892 - -0.0 194,892 - -0.7 194,893 + +0.8
Or see this region's nucleotide sequence