Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04193 and H281DRAFT_04194 are separated by 90 nucleotides H281DRAFT_04194 and H281DRAFT_04195 are separated by 329 nucleotides
H281DRAFT_04193: H281DRAFT_04193 - branched chain amino acid aminotransferase apoenzyme, at 312,760 to 313,683
_04193
H281DRAFT_04194: H281DRAFT_04194 - Uncharacterized conserved protein, contains Zn-finger domain, at 313,774 to 313,968
_04194
H281DRAFT_04195: H281DRAFT_04195 - heptosyltransferase-2, at 314,298 to 315,323
_04195
Position (kb) 313
314 Strain fitness (log2 ratio) -2
-1
0
1 at 313.150 kb on + strand, within H281DRAFT_04193 at 313.300 kb on + strand, within H281DRAFT_04193 at 313.333 kb on + strand, within H281DRAFT_04193 at 313.333 kb on + strand, within H281DRAFT_04193 at 313.387 kb on + strand at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.503 kb on + strand, within H281DRAFT_04193 at 313.657 kb on + strand at 313.657 kb on + strand at 313.681 kb on + strand at 313.682 kb on - strand at 313.757 kb on + strand at 313.758 kb on - strand at 313.930 kb on + strand, within H281DRAFT_04194 at 314.001 kb on + strand at 314.002 kb on - strand at 314.002 kb on - strand at 314.187 kb on + strand at 314.187 kb on + strand at 314.233 kb on + strand at 314.721 kb on + strand, within H281DRAFT_04195 at 314.721 kb on + strand, within H281DRAFT_04195 at 314.722 kb on - strand, within H281DRAFT_04195 at 314.860 kb on - strand, within H281DRAFT_04195
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 313,150 + H281DRAFT_04193 0.42 +0.4 313,300 + H281DRAFT_04193 0.58 -0.5 313,333 + H281DRAFT_04193 0.62 -0.0 313,333 + H281DRAFT_04193 0.62 -0.2 313,387 + -0.0 313,501 + H281DRAFT_04193 0.80 +0.1 313,501 + H281DRAFT_04193 0.80 -0.1 313,501 + H281DRAFT_04193 0.80 -0.3 313,501 + H281DRAFT_04193 0.80 +0.1 313,501 + H281DRAFT_04193 0.80 +0.8 313,501 + H281DRAFT_04193 0.80 -0.0 313,501 + H281DRAFT_04193 0.80 -0.4 313,501 + H281DRAFT_04193 0.80 +0.3 313,503 + H281DRAFT_04193 0.80 +0.1 313,657 + -0.4 313,657 + -0.4 313,681 + +0.1 313,682 - +0.4 313,757 + +0.1 313,758 - -0.3 313,930 + H281DRAFT_04194 0.80 +0.6 314,001 + -0.3 314,002 - -2.5 314,002 - -0.6 314,187 + -0.5 314,187 + -0.3 314,233 + -0.5 314,721 + H281DRAFT_04195 0.41 -1.7 314,721 + H281DRAFT_04195 0.41 -1.8 314,722 - H281DRAFT_04195 0.41 -1.8 314,860 - H281DRAFT_04195 0.55 -1.2
Or see this region's nucleotide sequence