Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03898 and H281DRAFT_03899 overlap by 4 nucleotides H281DRAFT_03899 and H281DRAFT_03900 are separated by 22 nucleotides H281DRAFT_03900 and H281DRAFT_03901 are separated by 280 nucleotides H281DRAFT_03901 and H281DRAFT_03902 are separated by 91 nucleotides
H281DRAFT_03898: H281DRAFT_03898 - DUF2300 domain-containing protein YfaQ, at 433,953 to 435,737
_03898
H281DRAFT_03899: H281DRAFT_03899 - Uncharacterized conserved protein YfaP, DUF2135 family, at 435,734 to 436,618
_03899
H281DRAFT_03900: H281DRAFT_03900 - Uncharacterized conserved protein YfaP, DUF2135 family, at 436,641 to 437,441
_03900
H281DRAFT_03901: H281DRAFT_03901 - hypothetical protein, at 437,722 to 438,114
_03901
H281DRAFT_03902: H281DRAFT_03902 - RNA polymerase, sigma 70 subunit, RpoD, at 438,206 to 440,200
_03902
Position (kb) 436
437
438 Strain fitness (log2 ratio) -1
0
1
2 at 436.095 kb on - strand, within H281DRAFT_03899 at 436.203 kb on - strand, within H281DRAFT_03899 at 436.203 kb on - strand, within H281DRAFT_03899 at 436.415 kb on - strand, within H281DRAFT_03899 at 436.415 kb on - strand, within H281DRAFT_03899 at 436.437 kb on - strand, within H281DRAFT_03899 at 436.534 kb on + strand at 436.681 kb on - strand at 436.796 kb on + strand, within H281DRAFT_03900 at 436.796 kb on + strand, within H281DRAFT_03900 at 436.796 kb on + strand, within H281DRAFT_03900 at 436.796 kb on + strand, within H281DRAFT_03900 at 436.981 kb on - strand, within H281DRAFT_03900 at 437.053 kb on - strand, within H281DRAFT_03900 at 437.053 kb on - strand, within H281DRAFT_03900 at 437.062 kb on - strand at 437.093 kb on - strand, within H281DRAFT_03900 at 437.093 kb on - strand, within H281DRAFT_03900 at 437.093 kb on - strand, within H281DRAFT_03900 at 437.238 kb on + strand, within H281DRAFT_03900 at 437.239 kb on - strand, within H281DRAFT_03900 at 437.239 kb on - strand, within H281DRAFT_03900 at 437.268 kb on + strand, within H281DRAFT_03900 at 437.268 kb on + strand, within H281DRAFT_03900 at 437.287 kb on - strand, within H281DRAFT_03900 at 437.287 kb on - strand, within H281DRAFT_03900 at 437.518 kb on - strand at 437.633 kb on - strand at 437.633 kb on - strand at 437.675 kb on + strand at 437.675 kb on + strand at 437.832 kb on + strand, within H281DRAFT_03901 at 437.833 kb on - strand, within H281DRAFT_03901 at 437.912 kb on + strand, within H281DRAFT_03901 at 437.913 kb on - strand, within H281DRAFT_03901 at 438.050 kb on - strand, within H281DRAFT_03901 at 438.109 kb on - strand at 438.367 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 436,095 - H281DRAFT_03899 0.41 +0.0 436,203 - H281DRAFT_03899 0.53 -0.3 436,203 - H281DRAFT_03899 0.53 -0.0 436,415 - H281DRAFT_03899 0.77 +1.3 436,415 - H281DRAFT_03899 0.77 -0.0 436,437 - H281DRAFT_03899 0.79 -0.1 436,534 + -0.8 436,681 - -0.4 436,796 + H281DRAFT_03900 0.19 +0.8 436,796 + H281DRAFT_03900 0.19 -1.4 436,796 + H281DRAFT_03900 0.19 +0.0 436,796 + H281DRAFT_03900 0.19 -1.2 436,981 - H281DRAFT_03900 0.42 +0.6 437,053 - H281DRAFT_03900 0.51 -0.4 437,053 - H281DRAFT_03900 0.51 +0.6 437,062 - +1.8 437,093 - H281DRAFT_03900 0.56 +0.1 437,093 - H281DRAFT_03900 0.56 +0.2 437,093 - H281DRAFT_03900 0.56 -0.3 437,238 + H281DRAFT_03900 0.75 +0.3 437,239 - H281DRAFT_03900 0.75 +0.2 437,239 - H281DRAFT_03900 0.75 +0.3 437,268 + H281DRAFT_03900 0.78 +0.3 437,268 + H281DRAFT_03900 0.78 -0.4 437,287 - H281DRAFT_03900 0.81 +0.7 437,287 - H281DRAFT_03900 0.81 -1.0 437,518 - -0.1 437,633 - +0.6 437,633 - +0.1 437,675 + -0.2 437,675 + +0.2 437,832 + H281DRAFT_03901 0.28 +0.6 437,833 - H281DRAFT_03901 0.28 +0.0 437,912 + H281DRAFT_03901 0.48 +0.2 437,913 - H281DRAFT_03901 0.49 +0.7 438,050 - H281DRAFT_03901 0.83 -0.2 438,109 - +0.0 438,367 + -0.6
Or see this region's nucleotide sequence