Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03897 and H281DRAFT_03898 are separated by 12 nucleotides H281DRAFT_03898 and H281DRAFT_03899 overlap by 4 nucleotides H281DRAFT_03899 and H281DRAFT_03900 are separated by 22 nucleotides
H281DRAFT_03897: H281DRAFT_03897 - hypothetical protein, at 429,132 to 433,940
_03897
H281DRAFT_03898: H281DRAFT_03898 - DUF2300 domain-containing protein YfaQ, at 433,953 to 435,737
_03898
H281DRAFT_03899: H281DRAFT_03899 - Uncharacterized conserved protein YfaP, DUF2135 family, at 435,734 to 436,618
_03899
H281DRAFT_03900: H281DRAFT_03900 - Uncharacterized conserved protein YfaP, DUF2135 family, at 436,641 to 437,441
_03900
Position (kb) 433
434
435
436 Strain fitness (log2 ratio) -1
0
1
2 at 433.084 kb on + strand, within H281DRAFT_03897 at 433.456 kb on + strand, within H281DRAFT_03897 at 433.564 kb on - strand at 433.564 kb on - strand at 433.564 kb on - strand at 433.564 kb on - strand at 433.611 kb on + strand at 433.743 kb on + strand at 433.744 kb on - strand at 433.860 kb on + strand at 433.872 kb on + strand at 433.872 kb on + strand at 433.873 kb on - strand at 433.873 kb on - strand at 434.067 kb on + strand at 434.068 kb on - strand at 434.259 kb on + strand, within H281DRAFT_03898 at 434.298 kb on + strand, within H281DRAFT_03898 at 434.298 kb on + strand, within H281DRAFT_03898 at 434.299 kb on - strand, within H281DRAFT_03898 at 434.331 kb on + strand, within H281DRAFT_03898 at 434.331 kb on + strand, within H281DRAFT_03898 at 434.332 kb on - strand, within H281DRAFT_03898 at 434.332 kb on - strand, within H281DRAFT_03898 at 434.628 kb on + strand, within H281DRAFT_03898 at 435.127 kb on - strand, within H281DRAFT_03898 at 435.585 kb on + strand at 435.586 kb on - strand at 435.586 kb on - strand at 435.591 kb on + strand at 435.592 kb on - strand at 435.636 kb on + strand at 435.636 kb on + strand at 435.637 kb on - strand at 435.637 kb on - strand at 435.637 kb on - strand at 435.637 kb on - strand at 436.095 kb on - strand, within H281DRAFT_03899 at 436.203 kb on - strand, within H281DRAFT_03899 at 436.203 kb on - strand, within H281DRAFT_03899 at 436.415 kb on - strand, within H281DRAFT_03899 at 436.415 kb on - strand, within H281DRAFT_03899 at 436.437 kb on - strand, within H281DRAFT_03899 at 436.534 kb on + strand at 436.681 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 433,084 + H281DRAFT_03897 0.82 +0.3 433,456 + H281DRAFT_03897 0.90 -0.7 433,564 - -1.1 433,564 - +0.7 433,564 - -0.2 433,564 - -0.0 433,611 + +0.3 433,743 + +1.8 433,744 - -0.2 433,860 + +0.3 433,872 + -0.8 433,872 + +0.8 433,873 - -0.7 433,873 - -0.7 434,067 + -0.2 434,068 - +0.3 434,259 + H281DRAFT_03898 0.17 -0.2 434,298 + H281DRAFT_03898 0.19 -0.0 434,298 + H281DRAFT_03898 0.19 -0.2 434,299 - H281DRAFT_03898 0.19 -0.2 434,331 + H281DRAFT_03898 0.21 +0.8 434,331 + H281DRAFT_03898 0.21 -0.2 434,332 - H281DRAFT_03898 0.21 -0.4 434,332 - H281DRAFT_03898 0.21 -0.2 434,628 + H281DRAFT_03898 0.38 -0.2 435,127 - H281DRAFT_03898 0.66 +0.2 435,585 + +0.2 435,586 - -0.6 435,586 - -0.6 435,591 + +0.8 435,592 - +0.6 435,636 + -0.4 435,636 + +0.0 435,637 - -0.0 435,637 - -0.1 435,637 - -0.0 435,637 - -0.4 436,095 - H281DRAFT_03899 0.41 +0.0 436,203 - H281DRAFT_03899 0.53 -0.3 436,203 - H281DRAFT_03899 0.53 -0.0 436,415 - H281DRAFT_03899 0.77 +1.3 436,415 - H281DRAFT_03899 0.77 -0.0 436,437 - H281DRAFT_03899 0.79 -0.1 436,534 + -0.8 436,681 - -0.4
Or see this region's nucleotide sequence