Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03421 and H281DRAFT_03422 are separated by 222 nucleotides H281DRAFT_03422 and H281DRAFT_03423 are separated by 18 nucleotides H281DRAFT_03423 and H281DRAFT_03424 are separated by 88 nucleotides
H281DRAFT_03421: H281DRAFT_03421 - transcriptional regulator, IclR family, at 494,649 to 495,494
_03421
H281DRAFT_03422: H281DRAFT_03422 - dihydroxyacid dehydratase (EC 4.2.1.9), at 495,717 to 497,495
_03422
H281DRAFT_03423: H281DRAFT_03423 - Regulator of RNase E activity RraA, at 497,514 to 498,248
_03423
H281DRAFT_03424: H281DRAFT_03424 - Sugar phosphate permease, at 498,337 to 499,665
_03424
Position (kb) 495
496
497
498 Strain fitness (log2 ratio) -1
0
1
2
3 at 495.230 kb on - strand, within H281DRAFT_03421 at 495.240 kb on + strand, within H281DRAFT_03421 at 495.240 kb on + strand, within H281DRAFT_03421 at 495.240 kb on + strand, within H281DRAFT_03421 at 495.344 kb on - strand, within H281DRAFT_03421 at 495.483 kb on - strand at 495.494 kb on + strand at 495.494 kb on + strand at 495.495 kb on - strand at 495.584 kb on + strand at 495.606 kb on + strand at 495.762 kb on + strand at 495.834 kb on + strand at 496.015 kb on - strand, within H281DRAFT_03422 at 496.468 kb on + strand, within H281DRAFT_03422 at 496.469 kb on - strand, within H281DRAFT_03422 at 497.126 kb on + strand, within H281DRAFT_03422 at 498.290 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 495,230 - H281DRAFT_03421 0.69 +0.4 495,240 + H281DRAFT_03421 0.70 +0.1 495,240 + H281DRAFT_03421 0.70 +0.5 495,240 + H281DRAFT_03421 0.70 -0.5 495,344 - H281DRAFT_03421 0.82 +0.1 495,483 - -0.8 495,494 + +0.5 495,494 + +2.1 495,495 - -0.4 495,584 + -0.2 495,606 + +1.3 495,762 + +0.1 495,834 + +0.2 496,015 - H281DRAFT_03422 0.17 +0.1 496,468 + H281DRAFT_03422 0.42 +0.4 496,469 - H281DRAFT_03422 0.42 +0.2 497,126 + H281DRAFT_03422 0.79 +0.7 498,290 - +3.2
Or see this region's nucleotide sequence