Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03284 and H281DRAFT_03285 are separated by 24 nucleotides H281DRAFT_03285 and H281DRAFT_03286 overlap by 4 nucleotides H281DRAFT_03286 and H281DRAFT_03287 are separated by 110 nucleotides
H281DRAFT_03284: H281DRAFT_03284 - beta-1,4-N-acetylglucosamine oligosaccharide 6-O-carbamoyltransferase NodU, at 341,328 to 343,073
_03284
H281DRAFT_03285: H281DRAFT_03285 - lipopolysaccharide heptosyltransferase II, at 343,098 to 344,372
_03285
H281DRAFT_03286: H281DRAFT_03286 - D,D-heptose 1,7-bisphosphate phosphatase, at 344,369 to 344,974
_03286
H281DRAFT_03287: H281DRAFT_03287 - Glycosyltransferase involved in cell wall bisynthesis, at 345,085 to 346,380
_03287
Position (kb) 343
344
345 Strain fitness (log2 ratio) -1
0
1 at 342.398 kb on - strand, within H281DRAFT_03284 at 342.856 kb on + strand, within H281DRAFT_03284 at 342.856 kb on + strand, within H281DRAFT_03284 at 343.069 kb on + strand at 343.070 kb on - strand at 343.070 kb on - strand at 343.387 kb on + strand, within H281DRAFT_03285 at 343.388 kb on - strand, within H281DRAFT_03285 at 343.512 kb on - strand, within H281DRAFT_03285 at 343.797 kb on - strand, within H281DRAFT_03285 at 343.996 kb on + strand, within H281DRAFT_03285 at 344.957 kb on + strand at 345.177 kb on - strand at 345.177 kb on - strand at 345.177 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 342,398 - H281DRAFT_03284 0.61 -0.1 342,856 + H281DRAFT_03284 0.88 -0.3 342,856 + H281DRAFT_03284 0.88 -0.1 343,069 + +0.6 343,070 - -0.0 343,070 - +0.4 343,387 + H281DRAFT_03285 0.23 +0.2 343,388 - H281DRAFT_03285 0.23 +1.1 343,512 - H281DRAFT_03285 0.32 +0.3 343,797 - H281DRAFT_03285 0.55 -0.3 343,996 + H281DRAFT_03285 0.70 +0.8 344,957 + -0.5 345,177 - -0.3 345,177 - +0.2 345,177 - -0.5
Or see this region's nucleotide sequence