Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03243 and H281DRAFT_03244 are separated by 77 nucleotides H281DRAFT_03244 and H281DRAFT_03245 are separated by 41 nucleotides H281DRAFT_03245 and H281DRAFT_03246 are separated by 53 nucleotides
H281DRAFT_03243: H281DRAFT_03243 - hypothetical protein, at 298,327 to 300,243
_03243
H281DRAFT_03244: H281DRAFT_03244 - hypothetical protein, at 300,321 to 300,653
_03244
H281DRAFT_03245: H281DRAFT_03245 - Uncharacterized iron-regulated membrane protein, at 300,695 to 302,221
_03245
H281DRAFT_03246: H281DRAFT_03246 - iron complex outermembrane recepter protein, at 302,275 to 304,719
_03246
Position (kb) 300
301
302
303 Strain fitness (log2 ratio) -2
-1
0
1
2 at 299.728 kb on + strand, within H281DRAFT_03243 at 299.728 kb on + strand, within H281DRAFT_03243 at 299.833 kb on + strand, within H281DRAFT_03243 at 299.834 kb on - strand, within H281DRAFT_03243 at 300.092 kb on + strand at 300.181 kb on + strand at 300.182 kb on - strand at 300.254 kb on + strand at 300.278 kb on - strand at 300.335 kb on + strand at 300.340 kb on + strand at 300.469 kb on - strand, within H281DRAFT_03244 at 300.474 kb on + strand, within H281DRAFT_03244 at 300.474 kb on + strand, within H281DRAFT_03244 at 300.475 kb on - strand, within H281DRAFT_03244 at 300.545 kb on + strand, within H281DRAFT_03244 at 300.638 kb on + strand at 300.661 kb on - strand at 300.696 kb on + strand at 300.777 kb on - strand at 301.054 kb on - strand, within H281DRAFT_03245 at 301.095 kb on + strand, within H281DRAFT_03245 at 301.095 kb on + strand, within H281DRAFT_03245 at 301.095 kb on + strand, within H281DRAFT_03245 at 301.143 kb on + strand, within H281DRAFT_03245 at 301.144 kb on - strand, within H281DRAFT_03245 at 301.343 kb on - strand, within H281DRAFT_03245 at 301.852 kb on - strand, within H281DRAFT_03245 at 302.333 kb on + strand at 302.334 kb on - strand at 302.381 kb on - strand at 302.424 kb on - strand at 302.424 kb on - strand at 302.444 kb on - strand at 302.481 kb on - strand at 302.481 kb on - strand at 302.538 kb on - strand, within H281DRAFT_03246 at 302.635 kb on - strand, within H281DRAFT_03246 at 302.636 kb on + strand, within H281DRAFT_03246 at 302.674 kb on + strand, within H281DRAFT_03246 at 302.674 kb on + strand, within H281DRAFT_03246 at 302.674 kb on + strand, within H281DRAFT_03246 at 302.674 kb on + strand, within H281DRAFT_03246 at 302.675 kb on - strand, within H281DRAFT_03246 at 302.895 kb on + strand, within H281DRAFT_03246 at 302.896 kb on - strand, within H281DRAFT_03246 at 303.213 kb on + strand, within H281DRAFT_03246
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 299,728 + H281DRAFT_03243 0.73 +0.6 299,728 + H281DRAFT_03243 0.73 +0.4 299,833 + H281DRAFT_03243 0.79 +0.3 299,834 - H281DRAFT_03243 0.79 +1.8 300,092 + +0.2 300,181 + +0.6 300,182 - -1.2 300,254 + -0.6 300,278 - +0.2 300,335 + -0.1 300,340 + +0.4 300,469 - H281DRAFT_03244 0.44 +0.5 300,474 + H281DRAFT_03244 0.46 +0.1 300,474 + H281DRAFT_03244 0.46 +0.1 300,475 - H281DRAFT_03244 0.46 -0.1 300,545 + H281DRAFT_03244 0.67 +0.2 300,638 + -1.1 300,661 - +1.0 300,696 + +0.6 300,777 - -0.3 301,054 - H281DRAFT_03245 0.24 -0.0 301,095 + H281DRAFT_03245 0.26 -0.8 301,095 + H281DRAFT_03245 0.26 -2.2 301,095 + H281DRAFT_03245 0.26 -1.2 301,143 + H281DRAFT_03245 0.29 -0.5 301,144 - H281DRAFT_03245 0.29 -2.5 301,343 - H281DRAFT_03245 0.42 -0.5 301,852 - H281DRAFT_03245 0.76 -0.5 302,333 + -0.5 302,334 - +0.6 302,381 - +0.1 302,424 - +0.1 302,424 - +0.8 302,444 - +0.2 302,481 - -0.3 302,481 - -0.2 302,538 - H281DRAFT_03246 0.11 +0.1 302,635 - H281DRAFT_03246 0.15 -0.2 302,636 + H281DRAFT_03246 0.15 -0.6 302,674 + H281DRAFT_03246 0.16 +1.2 302,674 + H281DRAFT_03246 0.16 +0.5 302,674 + H281DRAFT_03246 0.16 -1.0 302,674 + H281DRAFT_03246 0.16 -1.6 302,675 - H281DRAFT_03246 0.16 -0.2 302,895 + H281DRAFT_03246 0.25 -0.5 302,896 - H281DRAFT_03246 0.25 -0.2 303,213 + H281DRAFT_03246 0.38 -1.3
Or see this region's nucleotide sequence