Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03241 and H281DRAFT_03242 are separated by 118 nucleotides H281DRAFT_03242 and H281DRAFT_03243 are separated by 81 nucleotides H281DRAFT_03243 and H281DRAFT_03244 are separated by 77 nucleotides H281DRAFT_03244 and H281DRAFT_03245 are separated by 41 nucleotides
H281DRAFT_03241: H281DRAFT_03241 - Short-chain dehydrogenase, at 296,487 to 297,485
_03241
H281DRAFT_03242: H281DRAFT_03242 - Predicted dithiol-disulfide isomerase, DsbA family, at 297,604 to 298,245
_03242
H281DRAFT_03243: H281DRAFT_03243 - hypothetical protein, at 298,327 to 300,243
_03243
H281DRAFT_03244: H281DRAFT_03244 - hypothetical protein, at 300,321 to 300,653
_03244
H281DRAFT_03245: H281DRAFT_03245 - Uncharacterized iron-regulated membrane protein, at 300,695 to 302,221
_03245
Position (kb) 298
299
300
301 Strain fitness (log2 ratio) -2
-1
0
1
2 at 297.552 kb on - strand at 297.595 kb on - strand at 297.711 kb on - strand, within H281DRAFT_03242 at 297.784 kb on + strand, within H281DRAFT_03242 at 297.785 kb on - strand, within H281DRAFT_03242 at 297.785 kb on - strand, within H281DRAFT_03242 at 297.785 kb on - strand, within H281DRAFT_03242 at 297.889 kb on + strand, within H281DRAFT_03242 at 297.895 kb on + strand, within H281DRAFT_03242 at 298.402 kb on + strand at 298.403 kb on - strand at 298.451 kb on + strand at 298.452 kb on - strand at 298.498 kb on + strand at 298.642 kb on + strand, within H281DRAFT_03243 at 298.678 kb on + strand, within H281DRAFT_03243 at 298.710 kb on + strand, within H281DRAFT_03243 at 298.736 kb on + strand, within H281DRAFT_03243 at 298.737 kb on - strand, within H281DRAFT_03243 at 298.786 kb on + strand, within H281DRAFT_03243 at 298.802 kb on - strand, within H281DRAFT_03243 at 298.825 kb on - strand, within H281DRAFT_03243 at 298.855 kb on - strand, within H281DRAFT_03243 at 299.218 kb on + strand, within H281DRAFT_03243 at 299.219 kb on - strand, within H281DRAFT_03243 at 299.219 kb on - strand, within H281DRAFT_03243 at 299.398 kb on + strand, within H281DRAFT_03243 at 299.398 kb on + strand, within H281DRAFT_03243 at 299.453 kb on - strand, within H281DRAFT_03243 at 299.565 kb on + strand, within H281DRAFT_03243 at 299.612 kb on + strand, within H281DRAFT_03243 at 299.660 kb on + strand, within H281DRAFT_03243 at 299.661 kb on - strand, within H281DRAFT_03243 at 299.683 kb on - strand, within H281DRAFT_03243 at 299.728 kb on + strand, within H281DRAFT_03243 at 299.728 kb on + strand, within H281DRAFT_03243 at 299.833 kb on + strand, within H281DRAFT_03243 at 299.834 kb on - strand, within H281DRAFT_03243 at 300.092 kb on + strand at 300.181 kb on + strand at 300.182 kb on - strand at 300.254 kb on + strand at 300.278 kb on - strand at 300.335 kb on + strand at 300.340 kb on + strand at 300.469 kb on - strand, within H281DRAFT_03244 at 300.474 kb on + strand, within H281DRAFT_03244 at 300.474 kb on + strand, within H281DRAFT_03244 at 300.475 kb on - strand, within H281DRAFT_03244 at 300.545 kb on + strand, within H281DRAFT_03244 at 300.638 kb on + strand at 300.661 kb on - strand at 300.696 kb on + strand at 300.777 kb on - strand at 301.054 kb on - strand, within H281DRAFT_03245 at 301.095 kb on + strand, within H281DRAFT_03245 at 301.095 kb on + strand, within H281DRAFT_03245 at 301.095 kb on + strand, within H281DRAFT_03245 at 301.143 kb on + strand, within H281DRAFT_03245 at 301.144 kb on - strand, within H281DRAFT_03245
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 297,552 - +0.4 297,595 - +0.1 297,711 - H281DRAFT_03242 0.17 +0.1 297,784 + H281DRAFT_03242 0.28 +0.1 297,785 - H281DRAFT_03242 0.28 +0.5 297,785 - H281DRAFT_03242 0.28 +0.0 297,785 - H281DRAFT_03242 0.28 +0.1 297,889 + H281DRAFT_03242 0.44 +0.2 297,895 + H281DRAFT_03242 0.45 +0.3 298,402 + -0.6 298,403 - +1.2 298,451 + +0.2 298,452 - +0.5 298,498 + +0.1 298,642 + H281DRAFT_03243 0.16 +0.4 298,678 + H281DRAFT_03243 0.18 -0.8 298,710 + H281DRAFT_03243 0.20 -1.1 298,736 + H281DRAFT_03243 0.21 +0.5 298,737 - H281DRAFT_03243 0.21 +0.0 298,786 + H281DRAFT_03243 0.24 +0.0 298,802 - H281DRAFT_03243 0.25 +0.3 298,825 - H281DRAFT_03243 0.26 -0.0 298,855 - H281DRAFT_03243 0.28 +0.9 299,218 + H281DRAFT_03243 0.46 -0.2 299,219 - H281DRAFT_03243 0.47 +1.8 299,219 - H281DRAFT_03243 0.47 -0.5 299,398 + H281DRAFT_03243 0.56 +0.1 299,398 + H281DRAFT_03243 0.56 +0.0 299,453 - H281DRAFT_03243 0.59 -0.2 299,565 + H281DRAFT_03243 0.65 -0.0 299,612 + H281DRAFT_03243 0.67 +1.2 299,660 + H281DRAFT_03243 0.70 +0.3 299,661 - H281DRAFT_03243 0.70 -0.4 299,683 - H281DRAFT_03243 0.71 +0.1 299,728 + H281DRAFT_03243 0.73 +0.6 299,728 + H281DRAFT_03243 0.73 +0.4 299,833 + H281DRAFT_03243 0.79 +0.3 299,834 - H281DRAFT_03243 0.79 +1.8 300,092 + +0.2 300,181 + +0.6 300,182 - -1.2 300,254 + -0.6 300,278 - +0.2 300,335 + -0.1 300,340 + +0.4 300,469 - H281DRAFT_03244 0.44 +0.5 300,474 + H281DRAFT_03244 0.46 +0.1 300,474 + H281DRAFT_03244 0.46 +0.1 300,475 - H281DRAFT_03244 0.46 -0.1 300,545 + H281DRAFT_03244 0.67 +0.2 300,638 + -1.1 300,661 - +1.0 300,696 + +0.6 300,777 - -0.3 301,054 - H281DRAFT_03245 0.24 -0.0 301,095 + H281DRAFT_03245 0.26 -0.8 301,095 + H281DRAFT_03245 0.26 -2.2 301,095 + H281DRAFT_03245 0.26 -1.2 301,143 + H281DRAFT_03245 0.29 -0.5 301,144 - H281DRAFT_03245 0.29 -2.5
Or see this region's nucleotide sequence