Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03066 and H281DRAFT_03067 are separated by 123 nucleotides H281DRAFT_03067 and H281DRAFT_03068 are separated by 53 nucleotides H281DRAFT_03068 and H281DRAFT_03069 are separated by 447 nucleotides
H281DRAFT_03066: H281DRAFT_03066 - transcriptional regulator, LysR family, at 97,985 to 98,911
_03066
H281DRAFT_03067: H281DRAFT_03067 - peroxiredoxin, Ohr subfamily, at 99,035 to 99,451
_03067
H281DRAFT_03068: H281DRAFT_03068 - hypothetical protein, at 99,505 to 99,732
_03068
H281DRAFT_03069: H281DRAFT_03069 - Uncharacterized conserved protein, at 100,180 to 100,551
_03069
Position (kb) 99
100 Strain fitness (log2 ratio) -1
0
1
2 at 98.243 kb on - strand, within H281DRAFT_03066 at 98.263 kb on + strand, within H281DRAFT_03066 at 98.782 kb on + strand, within H281DRAFT_03066 at 98.783 kb on - strand, within H281DRAFT_03066 at 98.953 kb on - strand at 98.977 kb on - strand at 98.993 kb on + strand at 99.017 kb on - strand at 99.017 kb on - strand at 99.085 kb on - strand, within H281DRAFT_03067 at 99.467 kb on - strand at 99.469 kb on + strand at 99.507 kb on - strand at 99.507 kb on - strand at 99.507 kb on - strand at 99.724 kb on + strand at 99.850 kb on + strand at 99.866 kb on - strand at 99.908 kb on - strand at 99.908 kb on - strand at 100.089 kb on - strand at 100.123 kb on + strand at 100.145 kb on + strand at 100.364 kb on - strand, within H281DRAFT_03069
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 98,243 - H281DRAFT_03066 0.28 +2.6 98,263 + H281DRAFT_03066 0.30 +0.5 98,782 + H281DRAFT_03066 0.86 +0.4 98,783 - H281DRAFT_03066 0.86 -0.4 98,953 - -0.1 98,977 - -0.3 98,993 + -0.0 99,017 - -0.2 99,017 - +1.0 99,085 - H281DRAFT_03067 0.12 -0.3 99,467 - -0.1 99,469 + +2.4 99,507 - -0.6 99,507 - +0.0 99,507 - +0.1 99,724 + -1.2 99,850 + -0.4 99,866 - -0.4 99,908 - +0.1 99,908 - +0.2 100,089 - -0.0 100,123 + +0.1 100,145 + -0.6 100,364 - H281DRAFT_03069 0.49 +1.2
Or see this region's nucleotide sequence