Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02850 and H281DRAFT_02851 overlap by 4 nucleotides H281DRAFT_02851 and H281DRAFT_02852 are separated by 94 nucleotides H281DRAFT_02852 and H281DRAFT_02853 are separated by 659 nucleotides
H281DRAFT_02850: H281DRAFT_02850 - holin-like protein, at 443,485 to 443,856
_02850
H281DRAFT_02851: H281DRAFT_02851 - TIGR00659 family protein, at 443,853 to 444,593
_02851
H281DRAFT_02852: H281DRAFT_02852 - porin, GBP family, at 444,688 to 445,833
_02852
H281DRAFT_02853: H281DRAFT_02853 - alpha,alpha-trehalase, at 446,493 to 448,187
_02853
Position (kb) 444
445
446 Strain fitness (log2 ratio) -1
0
1
2 at 444.340 kb on + strand, within H281DRAFT_02851 at 444.819 kb on - strand, within H281DRAFT_02852 at 444.819 kb on - strand, within H281DRAFT_02852 at 444.872 kb on + strand, within H281DRAFT_02852 at 444.872 kb on + strand, within H281DRAFT_02852 at 444.873 kb on - strand, within H281DRAFT_02852 at 444.914 kb on + strand, within H281DRAFT_02852 at 444.951 kb on - strand, within H281DRAFT_02852 at 445.104 kb on - strand, within H281DRAFT_02852 at 445.247 kb on + strand, within H281DRAFT_02852 at 445.310 kb on + strand, within H281DRAFT_02852 at 445.312 kb on + strand, within H281DRAFT_02852 at 445.431 kb on - strand at 445.720 kb on - strand at 445.721 kb on + strand at 445.735 kb on - strand at 445.819 kb on + strand at 445.824 kb on - strand at 445.824 kb on - strand at 445.824 kb on - strand at 446.082 kb on + strand at 446.264 kb on + strand at 446.451 kb on - strand at 446.595 kb on + strand at 446.596 kb on - strand at 446.674 kb on + strand, within H281DRAFT_02853 at 446.675 kb on - strand, within H281DRAFT_02853 at 446.709 kb on + strand, within H281DRAFT_02853 at 446.815 kb on - strand, within H281DRAFT_02853 at 446.815 kb on - strand, within H281DRAFT_02853
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 444,340 + H281DRAFT_02851 0.66 -0.2 444,819 - H281DRAFT_02852 0.11 +0.1 444,819 - H281DRAFT_02852 0.11 +2.6 444,872 + H281DRAFT_02852 0.16 +0.2 444,872 + H281DRAFT_02852 0.16 +0.2 444,873 - H281DRAFT_02852 0.16 -0.1 444,914 + H281DRAFT_02852 0.20 -0.2 444,951 - H281DRAFT_02852 0.23 +0.5 445,104 - H281DRAFT_02852 0.36 +0.3 445,247 + H281DRAFT_02852 0.49 -1.1 445,310 + H281DRAFT_02852 0.54 +0.5 445,312 + H281DRAFT_02852 0.54 -0.0 445,431 - +0.9 445,720 - -0.1 445,721 + +0.2 445,735 - +0.2 445,819 + +0.6 445,824 - -0.0 445,824 - +0.5 445,824 - +0.9 446,082 + +0.1 446,264 + +0.0 446,451 - -0.8 446,595 + -1.1 446,596 - -0.1 446,674 + H281DRAFT_02853 0.11 +0.1 446,675 - H281DRAFT_02853 0.11 +0.4 446,709 + H281DRAFT_02853 0.13 +0.8 446,815 - H281DRAFT_02853 0.19 -0.2 446,815 - H281DRAFT_02853 0.19 +0.3
Or see this region's nucleotide sequence