Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02447 and H281DRAFT_02448 are separated by 185 nucleotides H281DRAFT_02448 and H281DRAFT_02449 are separated by 328 nucleotides H281DRAFT_02449 and H281DRAFT_02450 are separated by 465 nucleotides
H281DRAFT_02447: H281DRAFT_02447 - Short-chain dehydrogenase, at 12,057 to 13,073
_02447
H281DRAFT_02448: H281DRAFT_02448 - Predicted periplasmic or secreted lipoprotein, at 13,259 to 13,627
_02448
H281DRAFT_02449: H281DRAFT_02449 - hypothetical protein, at 13,956 to 14,273
_02449
H281DRAFT_02450: H281DRAFT_02450 - glycine betaine/proline transport system ATP-binding protein, at 14,739 to 15,920
_02450
Position (kb) 13
14
15 Strain fitness (log2 ratio) -1
0
1 at 13.070 kb on - strand at 13.108 kb on + strand at 13.171 kb on + strand at 13.234 kb on + strand at 13.560 kb on + strand, within H281DRAFT_02448 at 13.836 kb on - strand at 13.851 kb on - strand at 13.917 kb on - strand at 13.940 kb on + strand at 13.941 kb on - strand at 14.118 kb on - strand, within H281DRAFT_02449 at 14.163 kb on - strand, within H281DRAFT_02449 at 14.271 kb on + strand at 14.278 kb on + strand at 14.418 kb on + strand at 14.478 kb on - strand at 14.643 kb on + strand at 14.643 kb on + strand at 14.647 kb on + strand at 14.647 kb on + strand at 14.648 kb on - strand at 14.648 kb on - strand at 14.648 kb on - strand at 14.725 kb on + strand at 14.726 kb on - strand at 14.881 kb on + strand, within H281DRAFT_02450 at 14.881 kb on + strand, within H281DRAFT_02450 at 14.881 kb on + strand, within H281DRAFT_02450
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 13,070 - -0.2 13,108 + -0.5 13,171 + +0.6 13,234 + -0.5 13,560 + H281DRAFT_02448 0.82 -0.5 13,836 - -0.1 13,851 - +0.1 13,917 - +0.4 13,940 + -0.4 13,941 - -0.1 14,118 - H281DRAFT_02449 0.51 +0.5 14,163 - H281DRAFT_02449 0.65 +1.0 14,271 + -0.4 14,278 + -0.2 14,418 + +0.3 14,478 - -0.1 14,643 + -0.0 14,643 + +0.8 14,647 + +0.4 14,647 + +0.5 14,648 - +0.3 14,648 - +0.3 14,648 - +0.2 14,725 + -1.2 14,726 - -0.2 14,881 + H281DRAFT_02450 0.12 -0.1 14,881 + H281DRAFT_02450 0.12 -0.4 14,881 + H281DRAFT_02450 0.12 -0.6
Or see this region's nucleotide sequence