Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02447 and H281DRAFT_02448 are separated by 185 nucleotides H281DRAFT_02448 and H281DRAFT_02449 are separated by 328 nucleotides
H281DRAFT_02447: H281DRAFT_02447 - Short-chain dehydrogenase, at 12,057 to 13,073
_02447
H281DRAFT_02448: H281DRAFT_02448 - Predicted periplasmic or secreted lipoprotein, at 13,259 to 13,627
_02448
H281DRAFT_02449: H281DRAFT_02449 - hypothetical protein, at 13,956 to 14,273
_02449
Position (kb) 13
14 Strain fitness (log2 ratio) -1
0
1 at 12.354 kb on + strand, within H281DRAFT_02447 at 12.354 kb on + strand, within H281DRAFT_02447 at 12.528 kb on + strand, within H281DRAFT_02447 at 12.528 kb on + strand, within H281DRAFT_02447 at 12.528 kb on + strand, within H281DRAFT_02447 at 12.529 kb on - strand, within H281DRAFT_02447 at 12.550 kb on + strand, within H281DRAFT_02447 at 12.550 kb on + strand, within H281DRAFT_02447 at 12.560 kb on + strand, within H281DRAFT_02447 at 12.638 kb on + strand, within H281DRAFT_02447 at 12.766 kb on - strand, within H281DRAFT_02447 at 12.822 kb on + strand, within H281DRAFT_02447 at 12.822 kb on + strand, within H281DRAFT_02447 at 12.822 kb on + strand, within H281DRAFT_02447 at 12.850 kb on + strand, within H281DRAFT_02447 at 12.850 kb on + strand at 13.070 kb on - strand at 13.108 kb on + strand at 13.171 kb on + strand at 13.234 kb on + strand at 13.560 kb on + strand, within H281DRAFT_02448 at 13.836 kb on - strand at 13.851 kb on - strand at 13.917 kb on - strand at 13.940 kb on + strand at 13.941 kb on - strand at 14.118 kb on - strand, within H281DRAFT_02449 at 14.163 kb on - strand, within H281DRAFT_02449 at 14.271 kb on + strand at 14.278 kb on + strand at 14.418 kb on + strand at 14.478 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 12,354 + H281DRAFT_02447 0.29 +0.7 12,354 + H281DRAFT_02447 0.29 +0.2 12,528 + H281DRAFT_02447 0.46 +0.8 12,528 + H281DRAFT_02447 0.46 -0.3 12,528 + H281DRAFT_02447 0.46 +0.1 12,529 - H281DRAFT_02447 0.46 -0.6 12,550 + H281DRAFT_02447 0.48 -0.3 12,550 + H281DRAFT_02447 0.48 -0.2 12,560 + H281DRAFT_02447 0.49 +0.7 12,638 + H281DRAFT_02447 0.57 +0.4 12,766 - H281DRAFT_02447 0.70 +0.2 12,822 + H281DRAFT_02447 0.75 -0.9 12,822 + H281DRAFT_02447 0.75 +0.1 12,822 + H281DRAFT_02447 0.75 -0.1 12,850 + H281DRAFT_02447 0.78 -0.2 12,850 + +0.8 13,070 - -0.2 13,108 + -0.5 13,171 + +0.6 13,234 + -0.5 13,560 + H281DRAFT_02448 0.82 -0.5 13,836 - -0.1 13,851 - +0.1 13,917 - +0.4 13,940 + -0.4 13,941 - -0.1 14,118 - H281DRAFT_02449 0.51 +0.5 14,163 - H281DRAFT_02449 0.65 +1.0 14,271 + -0.4 14,278 + -0.2 14,418 + +0.3 14,478 - -0.1
Or see this region's nucleotide sequence