Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02445 and H281DRAFT_02446 are separated by 210 nucleotides H281DRAFT_02446 and H281DRAFT_02447 are separated by 391 nucleotides
H281DRAFT_02445: H281DRAFT_02445 - cytochrome c peroxidase, at 8,225 to 9,676
_02445
H281DRAFT_02446: H281DRAFT_02446 - phospholipase C, at 9,887 to 11,665
_02446
H281DRAFT_02447: H281DRAFT_02447 - Short-chain dehydrogenase, at 12,057 to 13,073
_02447
Position (kb)
9
10
11
12 Strain fitness (log2 ratio)
-1
0
1
2 at 8.952 kb on + strand, within H281DRAFT_02445 at 8.953 kb on - strand, within H281DRAFT_02445 at 9.234 kb on + strand, within H281DRAFT_02445 at 9.531 kb on + strand at 9.532 kb on - strand at 9.691 kb on + strand at 9.936 kb on + strand at 9.936 kb on + strand at 9.937 kb on - strand at 10.301 kb on - strand, within H281DRAFT_02446 at 10.310 kb on - strand, within H281DRAFT_02446 at 10.311 kb on + strand, within H281DRAFT_02446 at 10.345 kb on - strand, within H281DRAFT_02446 at 10.537 kb on - strand, within H281DRAFT_02446 at 10.959 kb on - strand, within H281DRAFT_02446 at 11.013 kb on + strand, within H281DRAFT_02446 at 11.014 kb on - strand, within H281DRAFT_02446 at 11.095 kb on - strand, within H281DRAFT_02446 at 11.197 kb on - strand, within H281DRAFT_02446 at 11.347 kb on + strand, within H281DRAFT_02446 at 11.463 kb on + strand, within H281DRAFT_02446 at 11.464 kb on - strand, within H281DRAFT_02446 at 11.712 kb on + strand at 11.712 kb on + strand at 11.713 kb on - strand at 11.713 kb on - strand at 11.713 kb on - strand at 11.713 kb on - strand at 11.819 kb on + strand at 11.819 kb on + strand at 11.826 kb on + strand at 11.838 kb on + strand at 11.838 kb on + strand at 11.842 kb on - strand at 11.940 kb on - strand at 11.988 kb on + strand at 12.243 kb on + strand, within H281DRAFT_02447 at 12.354 kb on + strand, within H281DRAFT_02447 at 12.354 kb on + strand, within H281DRAFT_02447 at 12.528 kb on + strand, within H281DRAFT_02447 at 12.528 kb on + strand, within H281DRAFT_02447 at 12.528 kb on + strand, within H281DRAFT_02447 at 12.529 kb on - strand, within H281DRAFT_02447 at 12.550 kb on + strand, within H281DRAFT_02447 at 12.550 kb on + strand, within H281DRAFT_02447 at 12.560 kb on + strand, within H281DRAFT_02447 at 12.638 kb on + strand, within H281DRAFT_02447
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 8,952 + H281DRAFT_02445 0.50 -0.7 8,953 - H281DRAFT_02445 0.50 +0.3 9,234 + H281DRAFT_02445 0.69 -0.5 9,531 + +0.3 9,532 - +0.3 9,691 + +0.1 9,936 + -0.4 9,936 + +0.3 9,937 - +0.7 10,301 - H281DRAFT_02446 0.23 -0.1 10,310 - H281DRAFT_02446 0.24 -0.3 10,311 + H281DRAFT_02446 0.24 -0.6 10,345 - H281DRAFT_02446 0.26 -0.2 10,537 - H281DRAFT_02446 0.37 +0.3 10,959 - H281DRAFT_02446 0.60 -0.7 11,013 + H281DRAFT_02446 0.63 -0.6 11,014 - H281DRAFT_02446 0.63 +0.3 11,095 - H281DRAFT_02446 0.68 -0.2 11,197 - H281DRAFT_02446 0.74 -0.2 11,347 + H281DRAFT_02446 0.82 -0.4 11,463 + H281DRAFT_02446 0.89 +0.6 11,464 - H281DRAFT_02446 0.89 +0.0 11,712 + +0.6 11,712 + +0.2 11,713 - -0.2 11,713 - +1.0 11,713 - -0.3 11,713 - +0.1 11,819 + +0.2 11,819 + -0.4 11,826 + +0.2 11,838 + -0.4 11,838 + -0.5 11,842 - -0.2 11,940 - +2.2 11,988 + -0.3 12,243 + H281DRAFT_02447 0.18 +1.1 12,354 + H281DRAFT_02447 0.29 +0.7 12,354 + H281DRAFT_02447 0.29 +0.2 12,528 + H281DRAFT_02447 0.46 +0.8 12,528 + H281DRAFT_02447 0.46 -0.3 12,528 + H281DRAFT_02447 0.46 +0.1 12,529 - H281DRAFT_02447 0.46 -0.6 12,550 + H281DRAFT_02447 0.48 -0.3 12,550 + H281DRAFT_02447 0.48 -0.2 12,560 + H281DRAFT_02447 0.49 +0.7 12,638 + H281DRAFT_02447 0.57 +0.4
Or see this region's nucleotide sequence