Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02443 and H281DRAFT_02444 are separated by 6 nucleotides H281DRAFT_02444 and H281DRAFT_02445 are separated by 94 nucleotides H281DRAFT_02445 and H281DRAFT_02446 are separated by 210 nucleotides
H281DRAFT_02443: H281DRAFT_02443 - alkylhydroperoxidase AhpD family core domain-containing protein, at 7,042 to 7,434
_02443
H281DRAFT_02444: H281DRAFT_02444 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 7,441 to 8,130
_02444
H281DRAFT_02445: H281DRAFT_02445 - cytochrome c peroxidase, at 8,225 to 9,676
_02445
H281DRAFT_02446: H281DRAFT_02446 - phospholipase C, at 9,887 to 11,665
_02446
Position (kb) 8
9
10 Strain fitness (log2 ratio) -1
0
1 at 7.252 kb on + strand, within H281DRAFT_02443 at 7.433 kb on - strand at 7.539 kb on + strand, within H281DRAFT_02444 at 7.539 kb on + strand, within H281DRAFT_02444 at 7.627 kb on - strand, within H281DRAFT_02444 at 7.838 kb on - strand, within H281DRAFT_02444 at 8.051 kb on - strand, within H281DRAFT_02444 at 8.168 kb on + strand at 8.168 kb on + strand at 8.275 kb on + strand at 8.351 kb on + strand at 8.352 kb on - strand at 8.352 kb on - strand at 8.481 kb on + strand, within H281DRAFT_02445 at 8.536 kb on + strand, within H281DRAFT_02445 at 8.594 kb on + strand, within H281DRAFT_02445 at 8.820 kb on + strand, within H281DRAFT_02445 at 8.952 kb on + strand, within H281DRAFT_02445 at 8.953 kb on - strand, within H281DRAFT_02445 at 9.234 kb on + strand, within H281DRAFT_02445 at 9.531 kb on + strand at 9.532 kb on - strand at 9.691 kb on + strand at 9.936 kb on + strand at 9.936 kb on + strand at 9.937 kb on - strand at 10.301 kb on - strand, within H281DRAFT_02446 at 10.310 kb on - strand, within H281DRAFT_02446 at 10.311 kb on + strand, within H281DRAFT_02446 at 10.345 kb on - strand, within H281DRAFT_02446 at 10.537 kb on - strand, within H281DRAFT_02446
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 7,252 + H281DRAFT_02443 0.53 +0.5 7,433 - -0.0 7,539 + H281DRAFT_02444 0.14 -0.5 7,539 + H281DRAFT_02444 0.14 +0.4 7,627 - H281DRAFT_02444 0.27 +0.0 7,838 - H281DRAFT_02444 0.58 -0.4 8,051 - H281DRAFT_02444 0.88 +0.4 8,168 + +0.1 8,168 + +0.2 8,275 + +0.3 8,351 + -0.3 8,352 - +0.3 8,352 - +0.1 8,481 + H281DRAFT_02445 0.18 -0.4 8,536 + H281DRAFT_02445 0.21 -1.4 8,594 + H281DRAFT_02445 0.25 +0.6 8,820 + H281DRAFT_02445 0.41 +0.7 8,952 + H281DRAFT_02445 0.50 -0.7 8,953 - H281DRAFT_02445 0.50 +0.3 9,234 + H281DRAFT_02445 0.69 -0.5 9,531 + +0.3 9,532 - +0.3 9,691 + +0.1 9,936 + -0.4 9,936 + +0.3 9,937 - +0.7 10,301 - H281DRAFT_02446 0.23 -0.1 10,310 - H281DRAFT_02446 0.24 -0.3 10,311 + H281DRAFT_02446 0.24 -0.6 10,345 - H281DRAFT_02446 0.26 -0.2 10,537 - H281DRAFT_02446 0.37 +0.3
Or see this region's nucleotide sequence