Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01669 and H281DRAFT_01670 overlap by 4 nucleotides H281DRAFT_01670 and H281DRAFT_01671 are separated by 22 nucleotides H281DRAFT_01671 and H281DRAFT_01672 are separated by 652 nucleotides
H281DRAFT_01669: H281DRAFT_01669 - NAD(P)H dehydrogenase (quinone), at 549,531 to 550,238
_01669
H281DRAFT_01670: H281DRAFT_01670 - Enoyl-CoA hydratase/carnithine racemase, at 550,235 to 550,987
_01670
H281DRAFT_01671: H281DRAFT_01671 - indolepyruvate ferredoxin oxidoreductase, at 551,010 to 554,564
_01671
H281DRAFT_01672: H281DRAFT_01672 - transcriptional regulator, AsnC family, at 555,217 to 555,783
_01672
Position (kb) 551
552
553
554
555 Strain fitness (log2 ratio) -1
0
1 at 550.045 kb on + strand, within H281DRAFT_01669 at 550.118 kb on - strand at 550.420 kb on - strand, within H281DRAFT_01670 at 550.420 kb on - strand, within H281DRAFT_01670 at 550.588 kb on + strand, within H281DRAFT_01670 at 550.743 kb on - strand, within H281DRAFT_01670 at 550.832 kb on + strand, within H281DRAFT_01670 at 550.833 kb on - strand, within H281DRAFT_01670 at 551.499 kb on - strand at 551.500 kb on + strand, within H281DRAFT_01671 at 551.525 kb on + strand, within H281DRAFT_01671 at 551.587 kb on + strand, within H281DRAFT_01671 at 551.809 kb on - strand, within H281DRAFT_01671 at 552.038 kb on + strand, within H281DRAFT_01671 at 552.151 kb on + strand, within H281DRAFT_01671 at 552.237 kb on - strand, within H281DRAFT_01671 at 552.363 kb on + strand, within H281DRAFT_01671 at 552.364 kb on - strand, within H281DRAFT_01671 at 552.629 kb on - strand, within H281DRAFT_01671 at 552.680 kb on - strand, within H281DRAFT_01671 at 552.680 kb on - strand, within H281DRAFT_01671 at 552.704 kb on - strand, within H281DRAFT_01671 at 552.783 kb on + strand, within H281DRAFT_01671 at 552.784 kb on - strand, within H281DRAFT_01671 at 552.791 kb on - strand, within H281DRAFT_01671 at 552.919 kb on + strand, within H281DRAFT_01671 at 552.925 kb on - strand, within H281DRAFT_01671 at 553.119 kb on - strand, within H281DRAFT_01671 at 553.121 kb on - strand, within H281DRAFT_01671 at 553.121 kb on - strand, within H281DRAFT_01671 at 553.121 kb on - strand, within H281DRAFT_01671 at 553.169 kb on + strand, within H281DRAFT_01671 at 553.175 kb on + strand, within H281DRAFT_01671 at 553.175 kb on + strand, within H281DRAFT_01671 at 553.176 kb on - strand, within H281DRAFT_01671 at 553.176 kb on - strand, within H281DRAFT_01671 at 553.360 kb on + strand, within H281DRAFT_01671 at 553.605 kb on + strand, within H281DRAFT_01671 at 553.673 kb on - strand, within H281DRAFT_01671 at 553.673 kb on - strand, within H281DRAFT_01671 at 553.783 kb on - strand, within H281DRAFT_01671 at 553.809 kb on + strand, within H281DRAFT_01671 at 553.810 kb on - strand, within H281DRAFT_01671 at 553.997 kb on - strand, within H281DRAFT_01671 at 554.245 kb on - strand at 554.477 kb on - strand at 554.618 kb on + strand at 554.619 kb on - strand at 554.619 kb on - strand at 554.619 kb on - strand at 554.821 kb on + strand at 554.822 kb on - strand at 554.822 kb on - strand at 554.822 kb on - strand at 554.869 kb on - strand at 554.956 kb on - strand at 555.011 kb on + strand at 555.011 kb on + strand at 555.248 kb on + strand at 555.248 kb on + strand at 555.249 kb on - strand at 555.249 kb on - strand at 555.249 kb on - strand at 555.253 kb on - strand at 555.253 kb on - strand at 555.333 kb on + strand, within H281DRAFT_01672
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 550,045 + H281DRAFT_01669 0.73 +0.6 550,118 - +0.4 550,420 - H281DRAFT_01670 0.25 +0.7 550,420 - H281DRAFT_01670 0.25 +0.1 550,588 + H281DRAFT_01670 0.47 +0.4 550,743 - H281DRAFT_01670 0.67 -0.1 550,832 + H281DRAFT_01670 0.79 +0.3 550,833 - H281DRAFT_01670 0.79 -0.9 551,499 - +0.1 551,500 + H281DRAFT_01671 0.14 -0.3 551,525 + H281DRAFT_01671 0.14 +0.6 551,587 + H281DRAFT_01671 0.16 -0.1 551,809 - H281DRAFT_01671 0.22 +0.1 552,038 + H281DRAFT_01671 0.29 +0.1 552,151 + H281DRAFT_01671 0.32 -0.1 552,237 - H281DRAFT_01671 0.35 -1.0 552,363 + H281DRAFT_01671 0.38 +0.1 552,364 - H281DRAFT_01671 0.38 -0.4 552,629 - H281DRAFT_01671 0.46 +0.1 552,680 - H281DRAFT_01671 0.47 -0.4 552,680 - H281DRAFT_01671 0.47 +0.2 552,704 - H281DRAFT_01671 0.48 -0.9 552,783 + H281DRAFT_01671 0.50 -0.6 552,784 - H281DRAFT_01671 0.50 -0.1 552,791 - H281DRAFT_01671 0.50 -0.7 552,919 + H281DRAFT_01671 0.54 -0.0 552,925 - H281DRAFT_01671 0.54 -0.2 553,119 - H281DRAFT_01671 0.59 -0.4 553,121 - H281DRAFT_01671 0.59 -0.0 553,121 - H281DRAFT_01671 0.59 +0.7 553,121 - H281DRAFT_01671 0.59 -0.7 553,169 + H281DRAFT_01671 0.61 +0.8 553,175 + H281DRAFT_01671 0.61 -0.1 553,175 + H281DRAFT_01671 0.61 -0.6 553,176 - H281DRAFT_01671 0.61 +0.6 553,176 - H281DRAFT_01671 0.61 -0.1 553,360 + H281DRAFT_01671 0.66 -1.6 553,605 + H281DRAFT_01671 0.73 +0.1 553,673 - H281DRAFT_01671 0.75 -0.3 553,673 - H281DRAFT_01671 0.75 +0.2 553,783 - H281DRAFT_01671 0.78 +0.3 553,809 + H281DRAFT_01671 0.79 +0.1 553,810 - H281DRAFT_01671 0.79 -0.9 553,997 - H281DRAFT_01671 0.84 -0.2 554,245 - -0.5 554,477 - -0.4 554,618 + +0.4 554,619 - -0.1 554,619 - -0.4 554,619 - +0.9 554,821 + -0.9 554,822 - +0.3 554,822 - +0.8 554,822 - +0.0 554,869 - +0.2 554,956 - -0.6 555,011 + +0.7 555,011 + +0.1 555,248 + +0.2 555,248 + +0.9 555,249 - +0.1 555,249 - +0.7 555,249 - +0.2 555,253 - -0.6 555,253 - +0.1 555,333 + H281DRAFT_01672 0.20 -1.0
Or see this region's nucleotide sequence