Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01669 and H281DRAFT_01670 overlap by 4 nucleotides H281DRAFT_01670 and H281DRAFT_01671 are separated by 22 nucleotides
H281DRAFT_01669: H281DRAFT_01669 - NAD(P)H dehydrogenase (quinone), at 549,531 to 550,238
_01669
H281DRAFT_01670: H281DRAFT_01670 - Enoyl-CoA hydratase/carnithine racemase, at 550,235 to 550,987
_01670
H281DRAFT_01671: H281DRAFT_01671 - indolepyruvate ferredoxin oxidoreductase, at 551,010 to 554,564
_01671
Position (kb) 550
551 Strain fitness (log2 ratio) -1
0
1 at 549.463 kb on - strand at 549.613 kb on + strand, within H281DRAFT_01669 at 549.614 kb on - strand, within H281DRAFT_01669 at 549.614 kb on - strand, within H281DRAFT_01669 at 549.614 kb on - strand, within H281DRAFT_01669 at 549.614 kb on - strand, within H281DRAFT_01669 at 549.614 kb on - strand, within H281DRAFT_01669 at 549.785 kb on + strand, within H281DRAFT_01669 at 549.959 kb on + strand, within H281DRAFT_01669 at 550.045 kb on + strand, within H281DRAFT_01669 at 550.118 kb on - strand at 550.420 kb on - strand, within H281DRAFT_01670 at 550.420 kb on - strand, within H281DRAFT_01670 at 550.588 kb on + strand, within H281DRAFT_01670 at 550.743 kb on - strand, within H281DRAFT_01670 at 550.832 kb on + strand, within H281DRAFT_01670 at 550.833 kb on - strand, within H281DRAFT_01670 at 551.499 kb on - strand at 551.500 kb on + strand, within H281DRAFT_01671 at 551.525 kb on + strand, within H281DRAFT_01671 at 551.587 kb on + strand, within H281DRAFT_01671 at 551.809 kb on - strand, within H281DRAFT_01671
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 549,463 - +0.4 549,613 + H281DRAFT_01669 0.12 +0.3 549,614 - H281DRAFT_01669 0.12 -0.9 549,614 - H281DRAFT_01669 0.12 -0.4 549,614 - H281DRAFT_01669 0.12 -0.8 549,614 - H281DRAFT_01669 0.12 -1.5 549,614 - H281DRAFT_01669 0.12 -0.7 549,785 + H281DRAFT_01669 0.36 -1.2 549,959 + H281DRAFT_01669 0.60 -0.1 550,045 + H281DRAFT_01669 0.73 +0.6 550,118 - +0.4 550,420 - H281DRAFT_01670 0.25 +0.7 550,420 - H281DRAFT_01670 0.25 +0.1 550,588 + H281DRAFT_01670 0.47 +0.4 550,743 - H281DRAFT_01670 0.67 -0.1 550,832 + H281DRAFT_01670 0.79 +0.3 550,833 - H281DRAFT_01670 0.79 -0.9 551,499 - +0.1 551,500 + H281DRAFT_01671 0.14 -0.3 551,525 + H281DRAFT_01671 0.14 +0.6 551,587 + H281DRAFT_01671 0.16 -0.1 551,809 - H281DRAFT_01671 0.22 +0.1
Or see this region's nucleotide sequence