Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01666 and H281DRAFT_01667 are separated by 98 nucleotides H281DRAFT_01667 and H281DRAFT_01668 are separated by 150 nucleotides
H281DRAFT_01666: H281DRAFT_01666 - 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39), at 545,309 to 546,364
_01666
H281DRAFT_01667: H281DRAFT_01667 - DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain, at 546,463 to 547,692
_01667
H281DRAFT_01668: H281DRAFT_01668 - gamma-aminobutyrate:proton symporter, AAT family, at 547,843 to 549,222
_01668
Position (kb) 546
547
548 Strain fitness (log2 ratio) -1
0
1 at 545.874 kb on + strand, within H281DRAFT_01666 at 545.875 kb on - strand, within H281DRAFT_01666 at 546.362 kb on + strand at 546.363 kb on - strand at 546.376 kb on + strand at 546.527 kb on - strand at 546.716 kb on + strand, within H281DRAFT_01667 at 546.773 kb on + strand, within H281DRAFT_01667 at 546.810 kb on - strand, within H281DRAFT_01667 at 546.887 kb on + strand, within H281DRAFT_01667 at 546.888 kb on - strand, within H281DRAFT_01667 at 546.888 kb on - strand, within H281DRAFT_01667 at 546.909 kb on - strand, within H281DRAFT_01667 at 547.562 kb on + strand, within H281DRAFT_01667 at 547.562 kb on + strand, within H281DRAFT_01667 at 547.562 kb on + strand, within H281DRAFT_01667 at 548.143 kb on - strand, within H281DRAFT_01668 at 548.645 kb on - strand, within H281DRAFT_01668
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 545,874 + H281DRAFT_01666 0.54 +0.2 545,875 - H281DRAFT_01666 0.54 -0.8 546,362 + +0.2 546,363 - -0.2 546,376 + +1.0 546,527 - +0.3 546,716 + H281DRAFT_01667 0.21 -0.3 546,773 + H281DRAFT_01667 0.25 +0.4 546,810 - H281DRAFT_01667 0.28 -0.2 546,887 + H281DRAFT_01667 0.34 -0.4 546,888 - H281DRAFT_01667 0.35 -0.1 546,888 - H281DRAFT_01667 0.35 -1.3 546,909 - H281DRAFT_01667 0.36 +0.1 547,562 + H281DRAFT_01667 0.89 -0.4 547,562 + H281DRAFT_01667 0.89 -0.0 547,562 + H281DRAFT_01667 0.89 +0.1 548,143 - H281DRAFT_01668 0.22 -0.2 548,645 - H281DRAFT_01668 0.58 -0.6
Or see this region's nucleotide sequence