Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01349 and H281DRAFT_01350 are separated by 171 nucleotides H281DRAFT_01350 and H281DRAFT_01351 are separated by 351 nucleotides H281DRAFT_01351 and H281DRAFT_01352 are separated by 200 nucleotides
H281DRAFT_01349: H281DRAFT_01349 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase, at 191,903 to 193,021
_01349
H281DRAFT_01350: H281DRAFT_01350 - DNA-binding protein HU-beta, at 193,193 to 193,471
_01350
H281DRAFT_01351: H281DRAFT_01351 - hypothetical protein, at 193,823 to 194,206
_01351
H281DRAFT_01352: H281DRAFT_01352 - diguanylate cyclase/phosphodiesterase, at 194,407 to 196,380
_01352
Position (kb) 193
194
195 Strain fitness (log2 ratio) -1
0
1
2 at 192.951 kb on + strand at 193.488 kb on + strand at 193.489 kb on - strand at 193.506 kb on + strand at 193.541 kb on + strand at 193.542 kb on - strand at 193.579 kb on + strand at 193.579 kb on + strand at 193.580 kb on - strand at 193.642 kb on + strand at 193.642 kb on + strand at 193.642 kb on + strand at 193.643 kb on - strand at 193.839 kb on + strand at 193.839 kb on + strand at 193.839 kb on + strand at 193.839 kb on + strand at 193.840 kb on - strand at 193.840 kb on - strand at 194.116 kb on - strand, within H281DRAFT_01351 at 194.134 kb on + strand, within H281DRAFT_01351 at 194.184 kb on + strand at 194.184 kb on + strand at 194.260 kb on - strand at 194.276 kb on + strand at 194.355 kb on + strand at 194.355 kb on + strand at 194.356 kb on - strand at 194.367 kb on + strand at 194.513 kb on - strand at 194.630 kb on + strand, within H281DRAFT_01352 at 194.794 kb on + strand, within H281DRAFT_01352
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 192,951 + -0.3 193,488 + +0.1 193,489 - -0.6 193,506 + +1.0 193,541 + -0.0 193,542 - +0.3 193,579 + -0.1 193,579 + +0.4 193,580 - +0.3 193,642 + +0.1 193,642 + -0.0 193,642 + +0.0 193,643 - -0.6 193,839 + -0.4 193,839 + -0.4 193,839 + -0.7 193,839 + +0.7 193,840 - +0.0 193,840 - -0.5 194,116 - H281DRAFT_01351 0.76 -0.4 194,134 + H281DRAFT_01351 0.81 -1.3 194,184 + -0.1 194,184 + +0.7 194,260 - +1.8 194,276 + -0.4 194,355 + +0.3 194,355 + +0.1 194,356 - +0.6 194,367 + -0.2 194,513 - +0.2 194,630 + H281DRAFT_01352 0.11 +0.3 194,794 + H281DRAFT_01352 0.20 +0.2
Or see this region's nucleotide sequence